Oncorhynchus tshawytscha (Chinook salmon): 112239265
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Entry
112239265 CDS
T05605
Symbol
l3mbtl1b
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112239265 (l3mbtl1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112239265 (l3mbtl1b)
03036 Chromosome and associated proteins [BR:
otw03036
]
112239265 (l3mbtl1b)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
112239265 (l3mbtl1b)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
112239265 (l3mbtl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
Motif
Other DBs
NCBI-GeneID:
112239265
NCBI-ProteinID:
XP_024263520
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All DBs
Position
LG03:438605..450185
Genome browser
AA seq
826 aa
AA seq
DB search
MTDTPHSDGPSQGAEFDMMGALDWQDGIATLPGSDIKFRMTEFGTLEIVTEPEVKESGPT
PQNPAQSKSPTPPPEAQSESSAASSAAKEVQPLAPKAQGPVLLSLEEGPTVEGPMVEEPR
VEVGPEAEAGPRAVMASCRSCGGSGPLESFLQGKYCSSICVQPSSGRSSPGERREREGGE
GGLGKRVRKKRKIYMDSGDEEEDNQEEEEDKSKAVKGRRAAKLAKLVTAPPNKKRPWSWP
SYMEEEKAIAAPLKLFKEHQSFPQSRNAFKVGMKLEGLDPCHPSLFCVLSVAEIQGYRVR
LHFDGYPECYDFWVNADTWDVKPAGWCEKMGHKLLLPKGCKDGEFNWNMYVKNCRGQLAP
KHLFKSLNTSVTPSGFRAGMKLEAVDKKNPYLICVASIAAAVDNRLLIHFDNWDDTYDYW
CDASSPYIHPVGYCEEAELTLTTPAEYKHPRSFSWDKYMEETGTQAAPARAFKLRPCHGF
QAGMKLEAVDKRNPMLIRIATIAEVEDHRLRIHFDGWSEEYDYWVDADCPDLHPVGWCQK
TSHPLQHPSNGSTDMLVLPGQGCPTPGCNGVGHIRGPRYGTHYTGVSCPYSEMNLNREGQ
VPDRLSGERPMTLSGPHHRGRRPDPPPHTQTNSPTTPEQPEPADDSPQTSVTRGPTVDEG
EQSRCSSQSEPPGGSSEPINDGAKAKRSAPVPKYLKLHVVKQESGDGKDSLSLQQALHES
VFSPGGSSSPPHRVALCWDKHCQLLPEVLGLTAKRVATWTADEVASFVKGLPGCKEHAAT
FRTEQMDGEAFLLLTQADIVKILSIKLGPALKIYNAILMLKNADEE
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgactgacacccctcacagtgatggcccctcccagggggcagagtttgacatgatgggt
gctctggactggcaggacggaatcgccacactgcctggcagcgacatcaagttccgtatg
acagagtttggaactttggagatcgtgacagagccagaggtcaaagagtcagggccaacc
ccccagaaccccgcccagtcgaaaagccccacccctccaccagaggcccaatcagagagc
agcgcagcctcttctgcagccaaggaagtccagccacttgcacccaaggctcaaggccct
gtgcttctgtctctagaggagggtcccactgtggagggtcccatggtggaggagcccagg
gtggaggtaggccccgaggcggaggcaggccccagggctgtgatggctagctgtaggtcg
tgtgggggctccggtccactggaaagtttcctccagggcaaatactgcagctccatttgt
gtccagccctccagtggcaggtcatcacccggagagcggagggagagagaggggggggag
gggggactggggaaacgagtgaggaagaagaggaagatctacatggactctggtgatgaa
gaggaagacaaccaggaggaggaagaggacaagtccaaggctgtcaaagggaggagagct
gctaagctggcaaagctagtgacagccccacccaataagaagcgaccctggagctggccc
tcctacatggaggaggagaaggctatagctgccccccttaaactgttcaaggagcaccag
tcgttccctcagagcaggaatgccttcaaagtggggatgaagttagaaggactggacccc
tgtcacccctctctgttctgtgtgctcagtgttgctgagatccagggttatagggtaagg
cttcatttcgacgggtatccagagtgctatgacttctgggtaaatgctgacacctgggat
gtgaagccggcgggctggtgtgagaagatgggacacaagctgctactgcctaaaggttgt
aaggatggggagttcaactggaacatgtatgtgaagaactgcagaggtcagctggccccc
aaacacctcttcaagagccttaacacgtcggtgactccgtcagggttccgtgcgggtatg
aagctagaggcggtggataagaagaacccatatctgatctgcgtagcgtccatcgcggct
gctgttgacaacagactcctcatacactttgacaactgggacgacacctatgactactgg
tgtgatgccagcagtccctacatccaccctgtaggctactgtgaggaggctgagctgacc
ctcaccacccctgctgagtataagcacccgaggagtttttcctgggataaatacatggag
gagactggcacacaggcagcccctgcacgtgccttcaaactgcgtccgtgccatgggttc
caggctggaatgaagctggaagctgtcgataagaggaatcccatgctcatccgcatagca
accatcgcagaggtggaggaccaccgactgaggatccattttgatggctggagtgaggag
tatgactactgggtggatgctgactgcccagacctgcaccctgtgggctggtgtcagaag
actagtcatcccctacaacacccctccaatggctccactgatatgctggtcctaccaggg
cagggctgtcctaccccaggatgcaatggggtaggtcacatccgaggaccccgctacgga
acccactacacgggggtgagttgtccgtactcggagatgaacctgaacagggagggccag
gtaccagaccgtctgagtggagaacgacctatgaccctgagtgggcctcatcaccgtggg
cgacgcccagaccctcctccacacacccagacaaacagccccaccacaccggagcagccc
gagcctgcagacgactcccctcagaccagtgtaactagggggccgacggttgacgagggc
gaacaatccaggtgcagcagtcagagtgagccaccagggggctcctctgagcccatcaac
gacggagccaaggccaagaggtctgctccagtcccaaagtatctgaagctgcacgtcgtc
aagcaggagagtggagatgggaaagactccctgtctctccagcaggcgctccatgagtca
gtgttctccccaggtggctcctcctctccccctcacagggtggctctgtgctgggacaaa
cactgccagctgctccctgaggtcctgggcctcacagctaagagagttgcaacctggacc
gccgacgaggtggccagttttgtcaaagggctcccaggctgcaaagagcatgctgccacc
ttcaggacagagcaaatggatggagaggccttcctgcttctcacccaagcagacatagtc
aagatcctgtcaatcaaactaggccctgccctcaagatatacaacgccatactcatgctg
aagaacgctgatgaggagtga
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