Oncorhynchus tshawytscha (Chinook salmon): 112239433
Help
Entry
112239433 CDS
T05605
Symbol
smyd4
Name
(RefSeq) SET and MYND domain-containing protein 4 isoform X1
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112239433 (smyd4)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
112239433 (smyd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
SET
zf-MYND
TPR_BSK1_C
TPR_2
Motif
Other DBs
NCBI-GeneID:
112239433
NCBI-ProteinID:
XP_042165486
LinkDB
All DBs
Position
LG30:48236432..48251297
Genome browser
AA seq
785 aa
AA seq
DB search
MDLPCVEWQKHVEQKWSRLTLDEKKCFSSLLDIDEVFDFGLSQVIQEDVDFLSGISKDDP
VQKDLERAARCRKEGNSSFKTRDYTAAVLHYSQGVCHASLSSEQLSLCYANRSAALFHLQ
RYRECLEDIDRALNHGYPSHLKHKLQDRQAQCLNHFPNGTEGITTAKQGAGHQAEGVCSR
TNSTNPKPKSPNSQQQNGSASVSCLSPGLSVCFSPEKGRHLVATKGITAGEVILEDRAYS
CVLIPGMGGGRREETEEAGGVFGTEVRYCHQCLGETVSPVPCEGCSYARYCSEGCRRGAW
EWHHRWECPIGAELSTAGVMSQLALRVALKAGVKEVLRAREPIRDGDNDSKLIREKISSK
NSSFKPITEKIRPKMKNSGSSDATSTEPKVNDPSAYYHGDSYLSVYHLLPHVNGHAPSLR
FLCSVTIATLYLRLRQAGPPPVSWERGGASESMTCSNQSRAPEEGEGWAPELCLLGSVAL
RHMLQLRCNAQAVSLLRDTGDFTAVQSTQEVRIATAIFPTLSILNHSCCPNTSLNFRTSH
LVSPQPDRGSTDELVSTEPVSTGPEACSAPVSVSAGVAVSIRASRDICPGQEVLHCYGPH
SSRMVLCERRRLLQEQYHFLCICQACNLEQGEGPEGGGAGPDTHLQCGKCEAPVKQCSVD
SAGWFVCVRSSCGHRVSRSEMDLRLQEVRVLLEQAVDLLETDRPAQSVMLLQKAVSQAGV
FLKETHPLQGELADTMARAYSTMGEWRGAACQLERSVLAICSQYGQDSIELGLQLFKLAQ
LHFNG
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggacctgccgtgtgtcgagtggcaaaagcacgttgaacagaagtggagccgactcact
cttgatgagaagaaatgcttctcgtccctgttggacatagatgaggtctttgattttggc
ctgtctcaagtaatccaagaggacgtggactttctgtcgggcatttccaaggacgatcct
gtccagaaggacctggagcgagctgccagatgccggaaggagggcaactccagctttaaa
accagggactacacggctgctgtcctgcactactcacagggtgtgtgtcatgcgtctctg
agctcggagcagctctctctgtgctatgccaaccgttctgcagcgctattccacctccag
cgctacagggagtgcctcgaggacatcgacagagccctgaaccatggctacccaagtcac
ctgaagcacaaactacaggacagacaggcacagtgcctcaaccacttccccaacgggaca
gaggggataaccaccgccaagcagggggcagggcaccaggcagagggggtgtgtagcagg
accaactcaacaaatcccaaaccaaagtccccaaactcccagcagcagaatgggagtgct
tccgtgtcgtgtctctcccctggtttgtccgtatgcttcagccctgaaaaagggcgacac
ctggtggccaccaagggaatcacggccggagaggtgatattggaggacagggcttacagc
tgtgtgctaataccagggatggggggagggagaagagaggagacggaggaagcaggagga
gtgtttgggaccgaggtgaggtactgtcatcagtgtttgggggagacggtgagccctgtg
ccatgtgaggggtgcagctacgctcgctactgctcagaggggtgtcggaggggcgcgtgg
gagtggcatcatcgctgggagtgtccaatcggagccgagctgagtactgcgggggtgatg
tcacagctggcgctgagggtggcgttaaaagcgggggtgaaggaggtactgagggcacgg
gaaccaatcagagacggggataatgattctaaactaatcagagagaagattagctccaag
aattccagttttaagccaatcacagaaaagatccgcccaaagatgaagaattctgggtcc
agtgacgccacctcaactgagccgaaggtcaacgacccctctgcttattaccatggtgat
tcctacctgagcgtctaccacctgctgcctcatgtgaatggccacgcccccagcctgcgc
ttcttgtgctctgtcaccatagcaacgctctacctgcggctgcgccaggcgggacctcca
cctgtgtcctgggagaggggaggagcctcagaaagcatgacgtgcagtaaccaatcgcgg
gcccccgaggagggagagggctgggctccggagctatgcctgctgggaagtgtagctctg
aggcacatgctgcagctgagatgtaatgcccaggcagtgagcctgctcagagacacaggt
gattttactgcggtgcagtccacccaggaagtgcgcattgccacggcaatattccccaca
ctgagtatcctaaaccactcctgctgccccaacacaagcctcaacttcaggacctctcac
ctggtctcacctcaaccagaccgaggctctactgatgaactggtttccactgagcctgtt
tctactggtcctgaggcctgttctgctcctgtctccgtctcagctggagtagctgtctct
atcagagcatccagagacatctgtcctggacaggaagtcctccactgttacggtcctcac
agcagcaggatggtgttgtgtgagcgtcggcgactcctacaggagcagtaccacttcctg
tgtatctgtcaggcctgcaatctggagcagggggaggggccagagggcggaggggcaggg
ccagacacacacctgcagtgtgggaaatgcgaggcacctgtaaagcagtgcagcgtggac
agtgcagggtggttcgtgtgtgtgcggtcgtcttgcggtcatcgtgtgtcacgctctgaa
atggacctcagactgcaggaggtcagagttcttctggagcaggcagtggacctcctggag
acagacagaccagcccagtctgtcatgttgttacagaaggcagtgtctcaggctggtgtc
ttcctgaaagagactcatcctctacagggagaactggctgataccatggccagagcatat
tccactatgggtgagtggcgaggggcagcgtgccagttggagcgtagtgttttagccatc
tgttcccagtacggacaggacagtattgaactgggacttcagctctttaaactggcacag
ctacacttcaatgggtga
DBGET
integrated database retrieval system
