Oncorhynchus tshawytscha (Chinook salmon): 112239484
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Entry
112239484 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: MICAL-like protein 2
KO
K21068
MICAL-like protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112239484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112239484
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112239484
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112239484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bMERB_dom
CH
CAMSAP_CH
LIM
DUF5446
Motif
Other DBs
NCBI-GeneID:
112239484
NCBI-ProteinID:
XP_042169260
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MSAVKALQQWCKLQVQGYRDVTITNMTTSFRDGMAFCALIHRNRPDLIDFDSLMKENVYD
NNHLAFRVAEDELGIPALLDAEDMVALKIPDRLSILTYVSQYYNYFHGKSPIGGMAGIKR
PAEAYTEEGPSGKKNQAVVSKVFPASTPSKSATENRPPPSSSPKASTRPDRAAQDVLSER
SNKTXTLSSKCSVCNKHVHLVQRHLVDGRLYHRSCARCSTTLLSGTCKPGPTPGSFICTS
HHHPQGALPTHTPLRDLPKNNPTTPAESKYTSHPPPTVQTTPPLSYLPKNNPTTPSSSKY
TPHPPPTVQTTPLSDLSRNNPGAKYTDPPKSTPAPTPTSTPSKFVPSWLSSKSDGSKSTT
PSASSSRPSPGLSSLGIVSPAAPGPTAVPRNLNTTSTTQHARLQFFQSGNTTTGQENQGK
TQTPGQAPSLPTNRVPNAGTQGTVVGGQGVSVVVSLGGSGVGGKGECSGGDKGVNMVLGG
DRDVVQGRGRVVFKVDGDVKASPSKEDCSTKTQAAAVITKKLTDNTTTTTAGAVITKKLT
ENNTTTTTAGAVITKKLTDNNTTTTTAGAVITKKLTDNNTTKTTAGAVITKKLTDNNTTT
TTAGAVITKKLTDNNTTTAGASSPPWHPVGLKKTENRSPSLRSAPAETPKKETETPKKET
GGRVKLKADPSLLAPLTPNTSTPTPASRTGLWNKTPDKASGAASPSNTMATADNSSSPAD
WRSRLKPASKPVGPKDSTPLHPDIQKVETLSRPWAGGSGNAQASVPAGSTQAPSSPPEAS
SPSPLNTGPGTWGVLTGKSSTTANGSNTDTKAPKPSKPDYIPKEEILRELQEIEDSVNEL
ERKGVDLEKQLRSCEEEGEEDVVMDDLMVEWFNLIRNKQVSMRRESELVYIAKTQDLEEQ
QPSVEQELRRLMDKPERLKTLWDRRREEELMVKLVEIVNDRNAIIDGLDDDRLREDEEDE
QLNKMMKTLGQSLHI
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggtgaaagcgctacaacagtggtgtaagctccaggttcagggttacagagat
gtcactatcaccaacatgaccacttctttcagggacgggatggctttctgcgccctcatt
caccgaaacagacccgacctcattgactttgattccctgatgaaggagaatgtctatgac
aacaaccacctggcgttccgggtagcggaggatgagttggggatcccagctctgttagat
gctgaggacatggtggccctgaagataccagacagactcagtattctgacatatgtctca
caatactacaactacttccatggcaaatcacctattggcggcatggcggggataaagcgt
ccggcggaggcatacacagaagaggggccttctgggaaaaagaaccaagcagttgtctcc
aaggtcttccccgcctctaccccctctaaatccgctactgagaaccgccctcccccctcc
tcctcacctaaagcctcaaccagaccagacagggcagcacaggatgtgttgtcggagcga
tccaataagacgnggactctgagcagtaagtgttccgtgtgtaataaacacgttcatctg
gtccagagacacctagtggatgggaggctgtatcacaggagctgtgccaggtgttccacc
actctactgtctggtacctgtaaacctggaccaacaccaggctccttcatctgtacctcc
catcaccatccccagggggcgctgccaacacacacccctctccgagacctgcccaaaaac
aaccctactacccctgctgaatccaaatacacctctcaccctcctcccactgtccagacc
acccctcctctctcatacctgcccaaaaacaaccctactaccccttcttcctccaaatac
acccctcaccctcctcccactgtccagaccacccctctctcagacctctccaggaataac
cccggagccaaatacactgaccccccgaaatccaccccagctccgacacccaccagtacc
ccctccaaattcgtccctagctggctgagctccaaatcagacggatccaaaagcaccacc
ccctctgcctcctcctcgcggcccagcccggggctctcctccctgggcatagtgagccct
gcagcccctggacccaccgctgtcccacggaacctcaacacgacttcaactacccagcat
gcccggctccagttcttccaatctgggaacaccaccactgggcaggagaaccagggcaag
acccagactccgggacaggcaccgagtctacccacaaatagagtcccgaacgctggcaca
caggggacagtagtggggggccagggtgtgagtgtggtagtgagtttgggtggcagtggg
gtagggggtaagggagagtgttcaggaggggataagggtgtgaatatggtgctaggtggg
gacagggatgtggttcagggtagaggtagagttgtcttcaaggtggatggtgatgtgaaa
gcctctccatctaaagaagactgcagtaccaagacccaggctgctgctgtcatcactaag
aaactaacagacaacaccacaacaacaacagctggtgctgtcatcactaagaaactaaca
gagaacaacaccacaacaacaacagctggtgctgtcatcactaagaaactaacagacaac
aacaccacaacaacaacagctggtgctgtcatcactaagaaactaacagacaacaacacc
acaaaaacaacagctggtgctgtcatcactaagaaactaacagacaacaacaccacaaca
acaacagctggtgctgtcatcactaagaaactaacagacaacaacaccacaacagctggt
gcttcaagtcctccgtggcatcctgtaggactgaagaagaccgagaacagatctccctct
ctcagatctgcccctgctgaaacgcctaagaaagagacggagactcctaaaaaggagact
gggggcagagttaagctaaaagcagacccgtctctcctcgcccccctcaccccaaacacg
tccaccccgaccccggccagcagaacaggcctgtggaacaaaaccccggataaggcatcc
ggagctgcttctcccagcaacactatggcaacagcagacaacagcagctctcctgctgac
tggcggtccaggctcaaacctgcctccaagcctgtaggacctaaagactccactcccctc
caccctgacattcagaaggttgaaaccctgtctcggccctgggccggtggatcaggaaac
gcccaggcttcagtccctgctgggtctactcaggccccctccagccccccagaagcctcc
tcacccagcccgctgaacaccggccctgggacatggggcgtcctgacagggaagagctca
acgacagctaacggctccaacacagacaccaaggcacctaaaccaagtaaaccggactac
atcccgaaggaagagatcctcagagagcttcaggagatagaggacagtgttaatgagttg
gagaggaaaggagtggacctggagaaacaactacgctcctgtgaagaggagggagaagag
gacgtggtgatggatgacctgatggtggaatggttcaacctcatcagaaacaagcaggtg
tccatgaggagagagtctgaactggtctacatagcgaagacacaggacttggaggaacag
cagcccagtgtagagcaggagctgaggagactcatggacaaacctgagcggctgaagacg
ttgtgggaccgtcgtagagaagaggagttgatggtcaaactggtggagatcgtcaatgac
agaaacgccatcatagacggactggacgatgacagactcagggaggatgaggaagatgag
cagctcaataagatgatgaagaccctaggtcagtccctacacatctag
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