Oncorhynchus tshawytscha (Chinook salmon): 112239572
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Entry
112239572 CDS
T05605
Name
(RefSeq) probable asparagine--tRNA ligase, mitochondrial
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112239572
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
otw01007
]
112239572
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112239572
Enzymes [BR:
otw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
112239572
Amino acid related enzymes [BR:
otw01007
]
Aminoacyl-tRNA synthetase
Class II (A)
112239572
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112239572
Prokaryotic type
112239572
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
SSB_1
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
112239572
NCBI-ProteinID:
XP_042152470
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All DBs
Position
LG13:92467301..92523374
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AA seq
483 aa
AA seq
DB search
MLPANRLWLSEAALGMLQSLRYYCQETPRKTRICEAISNLDVGTKIKVQGWVRSVRPQKE
NLFLHVNDGSSLQSLQVVASSELNHRLLTFGSAVEISGSLVTSPSRKQDVELQADQIDVV
GECNPVVIPFKIKEKHGLEYIRQFPHLRCKTNVFSSLLRIRSEATTAIQQYFKEKGFIQV
HTPVLTSNDCEGAGELFQVEPAGQEKNQDEEGHQHFFSVPAYLTVSGQLHLEVTAGAFPG
VYTFGPTFRAENSQSRRHLAEFYMVEAEISFTQSLEDLMKVMEDLFRSTTEHLLSQCPED
VALYHKHVSPGYRDYVDLMMKKRFNVITYTEAINILNSSSKKFAFKTDWGSDLQTEHEKY
LVKHCGDVPLFVTDYPYALKPFYTRDNQDQPLHTAAAVDLLVPGVGEMCGGSLREERLDL
LKTRLAQAGLDETYGWYLDLRRFGSVPHGGFGMGFERYLQCVLGVDNIKDVIPFPRYSHS
CLL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgttgccggctaataggttgtggttgtctgaagcagctcttggaatgttgcaaagcctt
cgatattactgccaggagacgcccagaaagacccgaatatgcgaggcaatctcaaattta
gatgtgggaacaaaaatcaaagtgcagggctgggttcgctctgtgagaccccagaaggag
aatctgttcctccatgtgaatgacgggagctcccttcagtctctacaggtagtggccagc
tcagagctcaaccacagactgctgacgtttgggagtgctgtggagatctcaggaagcctg
gtcacgagtcccagccgcaagcaggacgtggaactgcaggctgaccagatagatgtggtt
ggagaatgtaaccctgtggtgattccctttaagatcaaggagaaacatggtctggaatac
atccgtcagtttcctcacctgaggtgtaaaaccaacgtcttcagttccctgctgagaata
cgcagcgaagccaccactgctatacagcaatatttcaaggagaagggctttattcaggtc
cacaccccagtcctcacctctaatgactgtgaaggggcaggagagctcttccaggttgag
cctgcaggtcaggagaagaaccaggatgaggaagggcaccaacacttcttctctgtccca
gcgtacctgactgtctctgggcagctgcatctggaggtcacggctggggcgtttcctgga
gtgtacacttttggaccaacgttccgggcggagaactctcagagcagacgtcacctggct
gagttctacatggtggaggcagagatctccttcacacagtcactcgaggatctaatgaag
gttatggaagacttgttcaggtctacaacagaacatctcctatctcagtgtcctgaagat
gtggctttatatcacaaacatgtgtcacctggatacagggactatgtggatctaatgatg
aagaagaggtttaatgtgataacctacactgaagccataaacatcctcaacagcagctcc
aagaaatttgctttcaaaacagattggggctctgacttgcagacagagcatgagaagtac
ctggtgaaacattgtggcgatgttcctctcttcgtcactgattatccctatgccctgaag
cccttttacacacgagacaaccaggaccagcctctacacactgcagcagcagtagaccta
ttagtccccggagtaggagagatgtgtggaggttctctgagagaggagagactggaccta
ctgaagacacgtctagcacaggctggtttggatgagacatacggatggtatttggatctg
aggcggtttggttctgtccctcatggtgggtttggtatgggctttgagcgctacctgcag
tgtgttttgggggtcgacaacatcaaagacgttattccattccccagatactcccactct
tgccttctgtaa
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