Oncorhynchus tshawytscha (Chinook salmon): 112239673
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Entry
112239673 CDS
T05605
Name
(RefSeq) coronin-6-like
KO
K13886
coronin-1B/1C/6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112239673
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112239673
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40_4
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Trimer_CC
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
WD_LRWD1
eIF2A
Motif
Other DBs
NCBI-GeneID:
112239673
NCBI-ProteinID:
XP_042165004
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All DBs
Position
LG30:47545358..47593010
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AA seq
470 aa
AA seq
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MSRSIVRQSKFRHVFGQAVKTEQGYDDIRVSKVTWDSSFCAVNPKFLAVIVESSGGGAFL
VLPLSKMGRLDKNHPLVTGHAGPVLDIDWCPHNDNILASCSEDTTAMVWQIPDQMGTQPI
SEPIVVLEGHSKRVGIVTWHPTARNILLTAGSDNLIIIWNVGTGEALISMDDHPDLIYNV
SWNRNGSLFCTTCKDRRLRVCDPRKREVVAERMAPHDGIRPMRAIFTRDGNLFTTGFTRM
SQRELGLWDPTHFEEPIALLELDTSNGVLLPYYDPDTNMVYLCGKGDSSIRYFEITEEPP
YVHYLSTFSSKEPQRGMGFMPKRGVDVSKCEIARLYKLHDKKCEPIAMTVPRKSDLFQDD
LYPDTTGPDPALEPEEWLEGRDEDPILQSMRDGYVPPKSRELKVARKNVLDSRPIPRRSM
SSCDGSANLPPQLVDRLLEEVKNLKVTVLSQEKRICDLENKLSKYTNGTA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcagcatcgtacgacagagtaagttccgacacgtctttggccaggcggtgaag
acggagcagggctacgatgacatacgcgtttccaaggtgacgtgggacagctcgttctgt
gccgtcaacccaaagttcctggccgtcatcgtggagtccagcgggggcggagccttcctc
gtcctgcccctctctaagatgggtcgtctggataagaaccacccgttggtgactggccac
gctgggcctgtcctggacatcgactggtgccctcacaacgacaacatcctggcatcctgc
tcagaggacaccaccgccatggtgtggcagatccctgaccagatggggacccagcccata
tcagagcccattgtggtgctggagggacactccaaacgtgttggcattgtcacctggcac
cccactgcacgcaacatactactcactgcaggcagtgataacctgataataatctggaac
gtggggactggcgaggccctcatctccatggacgaccacccagacctcatctacaacgtc
agctggaaccgtaatggcagcctattctgcaccacctgtaaggaccgacgcctccgcgtt
tgtgatccccgcaagagagaggtggtcgcggagaggatggctccacacgatgggatccga
ccaatgagggccatcttcaccagagacggaaacctgttcactaccggcttcaccaggatg
agccagagagagctgggcctgtgggacccgacacattttgaggagcccattgctctgctg
gagttggacacaagtaacggggtgttgttaccgtactacgacccagacaccaacatggtt
tacctctgtggaaagggggacagtagtatccggtactttgagataacagaggaacctccc
tatgtccactacctcagtaccttcagcagcaaggagcctcagagggggatgggcttcatg
cccaagaggggagtggatgtcagcaagtgtgaaattgccagattatataaactccatgac
aagaagtgtgaacccattgccatgacagtacctagaaagtcggacctgttccaggatgac
ctgtatccagacacgacgggccccgacccggccctggagccagaggagtggctggagggg
cgagacgaggaccccatccttcagtccatgagggatggctacgttccccccaagagccgc
gagctcaaagtggctaggaagaatgttctggactctagacccatccccagacgcagcatg
tcctcctgcgatggctcagccaacctgccccctcagttggtagatcggttgttggaggaa
gttaagaatctcaaggtgacagttctgtctcaagagaagagaatctgtgacctggagaat
aaactatccaagtataccaacggcacagcctga
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