Oncorhynchus tshawytscha (Chinook salmon): 112239689
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Entry
112239689 CDS
T05605
Symbol
cercam
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00310
Lysine degradation
otw00514
Other types of O-glycan biosynthesis
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112239689 (cercam)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
112239689 (cercam)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112239689 (cercam)
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
112239689 (cercam)
Glycosyltransferases [BR:
otw01003
]
O-Glycan biosynthesis
O-linked Gal type
112239689 (cercam)
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GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
112239689
NCBI-ProteinID:
XP_024263888
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All DBs
Position
LG20:4387140..4401536
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AA seq
591 aa
AA seq
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MFLWVLVLVAFVSRTECYFSEEKYQEESKIQPPTIIIAIIARNAAHSLPYYLGALERQNY
PKNRISVWAATDHNADNTTAVLKEWLTVMQKFYHYVEWRPMEHPTSYPGEMGPKYWSNGR
YEYLMKLKQAALNFAKQRWADYILYVDTDNILTNPETLNLLIAENKSVVAPMLDSQGAYS
NYWCGITPQGYYRRTAEYFPTRHRHRLGCYPVPMVHSTFLLDMRKTGMKKLAFHPPHQDY
SWPFDDIIVFAFSCRVSEVQMYLCNKVRYGYLNVPAKPHHTIEDDSINFSHLILDAMIDG
PSMAPSKYVSLFPKRRDLMGFDEVYLINLRRRQDRRDRMLYSLNELEIDVKVVDAIDGGA
LNSSDIKILGVDILPGYYDPFSRRTLTKGEVGCFLSHYYIWKEMVDQQMDKALIFEDDVR
FQANFKRRVLRLMEEVEMVELDWDIIYLGRKQVTPGDEEEVVENVRNLVVADYSYWTLSY
AISLQGAQKLLNAEPLSKMLPVDEFLPIMYDKHINEDYKSHFANRNLQAFSTRPLLVQPA
HYAGDPEWVSDTETSTLWDDDNVRTDWRGSHKTLKGAPQSDMLQATYKDEL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttgggttttagttttagtggccttcgtttccagaacagaatgttatttttcg
gaggaaaaatatcaagaagaatcgaaaattcagccgccaacgattattattgcgatcatt
gctcggaacgcggcgcactctttgccatactacctcggggcgttggagaggcagaactat
cccaaaaaccgcatctctgtatgggcagcaacagatcacaacgctgacaacactacagct
gttctgaaagaatggctgaccgtcatgcagaagttctatcactatgtggagtggaggccc
atggagcatcctacgtcctacccaggagagatggggcctaaatactggagcaacggcaga
tatgaatacctgatgaaactcaaacaggctgctctcaacttcgccaagcaacgctgggct
gactacatactgtatgtagacacagacaacatcttgaccaacccagagaccctcaacctc
ctgatagcagagaacaagtctgtggtcgcccccatgttggactcccagggagcttactct
aactactggtgcggcatcactccacagggttactaccggcgtacggctgagtatttcccc
accagacaccgccatcggctgggctgctacccggtgcccatggtccactctaccttcctg
ctggacatgaggaagacgggaatgaagaagctggccttccaccctcctcaccaggactac
tcctggcccttcgatgacatcatcgtcttcgccttctcctgtcgcgtctcagaggtgcag
atgtacctgtgcaacaaggtgaggtatggatacctgaacgtcccagccaagcctcaccac
accatagaggacgacagcatcaacttcagccacctcatcctggacgccatgattgacgga
ccctccatggccccctccaaatatgtcagcctcttccccaaacggagagacctcatgggc
tttgatgaggtgtacctgatcaacctgcgtcggcgtcaggaccgtagggacaggatgctg
tactctctcaacgagctggagatcgacgtcaaagtggtggacgccatagacggaggagcg
ctgaacagcagtgatataaagatccttggagtggacatactacctggttactatgacccg
ttctctcgtcgtaccctgaccaaaggagaggtgggatgcttcctcagccactattacatc
tggaaggagatggtagaccagcagatggataaggctctgatcttcgaggacgacgtgcgt
ttccaggccaacttcaagcggcgcgtgctccgtctgatggaggaggtggagatggtggaa
ctggactgggacatcatttacctgggccgtaagcaggtgacgccgggtgacgaggaggag
gtggtggagaacgtgaggaacctggtggtagcagactattcctactggaccctgtcctac
gccatctctctccagggggcccagaagctgctcaacgccgaacccctctccaagatgctg
cccgtcgacgagttcctgcccatcatgtacgacaaacacatcaatgaggactacaagtct
cacttcgcgaaccgtaacctgcaggcgttctctacgcgcccccttctggtgcaaccagcc
cactacgctggggaccccgagtgggtgagcgacacggagacctccacgctgtgggacgac
gacaacgtgcgaacagactggaggggttcccacaaaaccctgaagggggcacctcaatcc
gacatgctgcaggcaacgtataaggatgagctctag
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