Oncorhynchus tshawytscha (Chinook salmon): 112239702
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Entry
112239702 CDS
T05605
Symbol
ttll4
Name
(RefSeq) tubulin polyglutamylase TTLL4 isoform X1
KO
K16601
tubulin polyglutamylase TTLL4 [EC:
6.3.2.62
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112239702 (ttll4)
04812 Cytoskeleton proteins [BR:
otw04812
]
112239702 (ttll4)
Enzymes [BR:
otw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.62 beta-tubulin-glutamate ligase
112239702 (ttll4)
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
112239702 (ttll4)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
112239702 (ttll4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
112239702
NCBI-ProteinID:
XP_042175984
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All DBs
Position
LG03:complement(79502343..79565246)
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AA seq
1267 aa
AA seq
DB search
MASNGAEDKLNKRASCSRSSTLIIRAKSAVFHTADSHTRPFSSHEKKTLQSCASVPRVTS
DSIGQLNARVGQTQNNHLHTASGTPLQRAYNRSVPAATYLANKPQRPGSAAANLANGHSN
GHCQPTVLSKSTQISSADIISYRHNPGVLEPTVNSYRPSCNLESLNLRSRILARKRALSP
QPAPYPTCPCPPKAERVPDSQNNTASQPAESTTTSMPTNQSVPWTSGKLRDNSKGFMRPT
MGKVPSCPRQETTQTRDSAKPLSPQTKSASYCRSGDNGDGKTQTKFTHHPPNTVPLQDRS
SHHQDVSLDPTWRLQDPHQFESLMAADMEGHSQRLGFCAAVHGAPGAPHNTSTERIRKVN
SEVEFTEAVRKLTQSRSALTPHPRNGTVNSFTTGTPGSNVDPVQIGKAMTNSPVISVSHS
PAPAKPSVPLCLTMRDQPVSMETSSASGLDSNTTTNSSSTTASMAPLPHAGITPTQSSTQ
ASATAISTAGITPTQPYTQATATASSGAGITPTQSYTQDSATASSIPENTEMGSESASGT
CQRPSVTSVTTQISAIHLTKERSVVSLQGGYSSSRYPPGLGEEQQAESPQLSSPQSVAMQ
EDGDGGEEDYPDDELENDCSGGDDDDDEGSDCSSMNDASSTASIPVLPNITDEELMSPEL
EDEGELKPALVPSMFPLIPPTLYFSTANQRVEPLPPEQRKLLKWKMSTVTPNIVKHTIAR
SHFKVTKKSHDWLGCWGHHMKSPGFKAIREYQKLNHFPGSFQIGRKDRLWRNLSKMQAQF
GKREFSFFPRSFVLPQDIKLLRKAWEDSGSRQKWIIKPPASARGIGIQVIHKWSQMPCKR
PLLVQKYLHKPYLISGNKFDLRIYVYVTCYDPLRVYIFQDGLVRFASCKYSSSMKSLGNK
FMHLTNYSVNKRNSDYQNNDSDKACQGHKWALKALWHYLGCKGVNTTLIWEKIKDIVMKT
IIASDPYVNTLVKLHLRSPYSCHELFGFDVMLDENLKPWVLEVNISPSLHSSTALDVAIK
GQMIRDVLNLAGFLLPQREEVLPSASSSASSLCGGTRERSRPEISTDEKVKRAFYLSQRF
ADQVQSCSRLKSQGTTGKFPRQEVDFFSSILDVLTPEDVRVLAETEDELSRKGEFERVFP
SHCSSRYLRFFKQPRYLNILLNQWETKYGQNRREGVCVLRSLCQKGVHLGTTDPAHLWSK
STYVPKSDHPRQEPRRSSVVVSHRTRPQPDQEEYCFSQEVTTSLLGSSSLATESTAIVPP
RDEELEG
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaatggagctgaagacaagttgaataaaagggcctcctgctcccggtcatca
actctcattattcgagccaagtcagcagtgtttcatactgctgacagtcacactaggccc
ttcagctcgcatgagaagaagacccttcagtcctgtgccagtgtcccccgggtcaccagt
gactctataggtcagctgaatgcgagggtgggtcagactcagaacaaccacctccatact
gcctcagggacccctctacaacgtgcctacaaccgttctgtgcctgctgccacttaccta
gctaacaagccacagcgtcctggtagcgcagctgctaatttagctaatggtcatagtaat
ggtcactgtcaaccaactgttctctctaagagtacacagatatctagtgctgacattatc
tcatacagacataaccctggtgtgttagagccaaccgtaaacagctatcggcccagctgc
aacttggaatcactaaatttaagatcacggatcctggcccgcaaaagagccttgtcgccc
cagcctgctccctatccaacgtgcccctgtccaccaaaggcagaacgtgtcccagactcg
cagaacaacactgcttcacagcctgctgaaagcaccaccaccagcatgcccaccaaccag
tcagtcccctggaccagtggcaagctgagagacaatagcaaagggtttatgaggcccact
atgggtaaagtgccttcctgtcccagacaggagactacccagacaagagactcagcaaaa
cctttgtctccccagaccaaatcggcctcctattgccgtagcggggacaatggggatggc
aaaacccagactaagttcacacaccacccccccaacactgtgcctttgcaggataggtca
tcccaccaccaggatgtgtcactggatccgacatggaggctccaggacccgcatcagttt
gagagcctgatggcagcagacatggagggtcactcccagaggctgggcttttgtgctgct
gtccatggggctcctggagctcctcataacacatcaacagagaggatcaggaaggtcaac
tctgaggtggagtttactgaggctgtgaggaagctgacccagtcacggagcgcgctcacc
cctcatcccaggaacgggactgttaatagttttactactggaacaccagggtccaacgtg
gatccagtccagattggcaaagcaatgactaatagccctgtcatctctgtcagccacagc
cctgctccagccaaaccctctgtaccactctgccttactatgagagaccagcctgtgtcc
atggagacctccagtgcctctggcctcgacagtaacaccacaacaaacagtagtagcaca
acggcctccatggcacctctaccccatgcagggataactccaacacagtcctctacccag
gccagtgccacagctatttctactgcagggataactccgacccagccctatacccaggcc
actgccacagctagttctggtgcagggataactccaacccagtcctatacccaggacagt
gccacagctagttctatcccagagaacactgagatgggttctgagtccgcctcaggtact
tgtcagaggccttctgtcacctcggtgaccacccagatatcagccatacacctgaccaag
gagaggagtgttgtgtctctacaggggggctacagctcctcccggtacccccctggcctg
ggggaggaacaacaggctgagtcacctcagctctccagtccacagagcgttgccatgcag
gaggatggagacggaggggaagaggactatcctgatgatgagctggagaatgactgcagt
ggtggtgatgatgatgatgatgaagggtctgactgctcctctatgaatgatgcctcgtcc
acagcctccatacccgtcctgccaaatataacggatgaggagctgatgagccctgaatta
gaggatgagggggagctgaagccagctctggtccccagcatgttccccctcattcctcct
acactgtatttcagcactgccaaccagagagtggagcccctgccaccagaacagaggaag
cttctcaaatggaagatgagcactgtgactcccaacatagtcaaacacaccatcgccagg
tcacactttaaagtcaccaagaaaagtcatgattggcttggctgctggggtcaccatatg
aagtctcctgggttcaaggccatcagggaataccagaagttaaaccacttccccggctcg
ttccagatcggtcgtaaggaccgtctgtggaggaacctgtctaagatgcaggctcagttt
ggtaagagggaattcagcttcttccctcgctccttcgttcttcctcaggacatcaagcta
ctgaggaaagcctgggaggacagtggtagcaggcagaaatggatcatcaagccgcctgcg
tctgctcggggtattggaatccaggttattcacaagtggagtcagatgccatgcaagaga
ccactcctggttcagaagtatctgcacaagccttatctcatcagtgggaataagtttgac
ctgcgtatctatgtgtatgtgacatgttacgacccgctccgcgtttacatcttccaggac
ggacttgtccgcttcgccagctgcaagtactcgtcgtctatgaaaagccttggcaacaag
ttcatgcacctgaccaactacagcgtgaacaagaggaactcagactatcagaacaatgac
agtgacaaggcctgccagggacacaagtgggctctgaaggctctgtggcactacttgggt
tgtaagggagtcaacaccacgctgatctgggagaagatcaaggacatcgtcatgaaaacc
atcattgcgtctgacccgtatgtcaacacgctggtcaagcttcacctgcgttccccctac
agctgtcacgagctgtttggctttgacgtcatgctggatgagaacctcaagccttgggtt
ctggaggtcaacatctcaccaagcctccactccagcaccgctctggacgtggccattaag
ggccagatgatcagagatgtgttgaacctggcaggtttccttctgcctcagagagaagag
gtgcttccctctgccagcagctctgccagcagtctgtgtggagggacacgggagagatcc
agacctgagatttcaactgatgagaaagtcaagcgggccttctacctgagccagcgcttc
gcagatcaggtacagtcatgcagccgtctgaagagccaaggaactactgggaagtttccc
agacaggaagtcgacttcttctcctccatcctggacgttctgactccagaggacgtacgt
gtcctggctgagacggaggacgagctgagcaggaagggagagtttgaacgagtcttcccc
tcccactgctcctcacgatacctgcgcttcttcaaacaaccacgctacctcaacatcctg
ctcaaccagtgggagaccaagtacggacagaacaggagagaaggagtctgtgtgctgagg
agtctgtgtcagaaaggagtccatctaggaaccaccgaccctgcacatctatggtccaag
tcgacctacgttcccaagtctgatcaccccaggcaggagccacgcagatcgagtgtggtg
gtgagtcacagaaccaggccccagccagaccaggaggagtactgtttctcccaggaggtc
accacctccctcctgggctcctccagcctggccaccgagtctacagccatcgtgccaccc
agagatgaggagttggagggttaa
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integrated database retrieval system
