Oncorhynchus tshawytscha (Chinook salmon): 112239707
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Entry
112239707 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: sorting nexin-13
KO
K17925
sorting nexin-13
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112239707
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112239707
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
112239707
NCBI-ProteinID:
XP_042165904
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All DBs
Position
LG31:30147187..30207049
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AA seq
954 aa
AA seq
DB search
MFAEASLSVWGWGGLGVVLFLITFGPFAVFYLAFYIFCFVGGGFAVTLLFGKTNSERHLE
RCEHSYLPATQTGILKTLDEMRLEPKPIQIDRRLTGSNYIDEPLQQVIQFALRDYIQYWY
YTLSEDDSFLLEIRQTVQNALVQFSTRSKEVDWQPYLTTRLVDDFATHLRVFRKAQDRLE
DSKQRDLSEEMVESFFEAEVEMERNICRDVVCTSLKDEEGFLRDLCEVLLYLLLPPGDFH
NKNMRYFLREILARGVLLPLVNQLSDPDYINQFVIWMIRDSSCNYEAFMNILKLTDRVSE
LEAVKDKALEELQYLRSLDTAGDDINVIKNQINSLMFVKKVCETRIQRLQSGKEVDALKL
AANLGKLCIIPLEHILVHNIALQFFMDYMLVAGAQAELFFWLTVEGYRVTAQQQLEVMEG
WQKDGRKGGDTKGLLKAAALGVYEQYLSDKASPRVQVDEASVLQLGEKLQKDSDPTPEIF
NDIQTTVYDMMLRDERFYPSFRQSPLYIRMLAELDMLKEPSYRGSDDGDGESFNGSPTGS
INLSLDDLSNSCHDDNIQLHAFISDTGVCNDHGKTYALYAITVLRRNHDGSEDSWKTYRR
YSDFHDFHMRITEQVKFENLTAILKLPGKKTFNNMDRDFLERRKKDLNSYLQLLLNPEMM
KACPTLVHYVYDFLENKQYSKGKGDFARKMDTFVNPLRSSMRNVSNAVKGLPDSLAGGMN
KAADNMGRMSEKLGQDIKQAVFKVPPMLPKSDFDPEHCRVSAQLDDNVDDNXPLRVMLLL
MDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDFMTAPEQVADYVKKFRD
SYWPNGILAESPPRRDKNIRMRTRVAAKTNLLGIMPDELKHIIGADTTRKGILRVFDMFQ
HGPMNRRLVYVLLEGFLETMFPHYKFPELFVKLHSRSPRTARYTQKVKSTFPKR
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagaggccagtctgtctgtgtggggatgggggggtctaggagtggtgctgttt
ctcatcacttttggacccttcgctgtcttctacctggccttctatatcttctgcttcgta
ggaggtggttttgcggtcactctgttgtttgggaaaaccaactcagagagacatctagag
aggtgtgaacactcctatcttccggccacacaaacgggtatactgaagacattggatgag
atgaggctggagccgaaacctatacagatagataggagactgactggctccaactacata
gacgagcctcttcaacaggtcatccagtttgctttgagagattatatccagtactggtat
tacactctgagtgaggatgattcttttctgctggaaatcagacagacggtccagaatgct
ctggtacagttctccacacggtctaaagaggtggactggcagccttatttgaccaccaga
ctggtggatgactttgctactcaccttcgagtcttcagaaaggcccaagacagactggag
gacagtaaacagagggacttgtcggaggagatggtggagtcattctttgaggcggaggtg
gagatggagaggaacatctgtagagacgtggtctgcacctccctgaaggatgaagaaggg
ttcctcagggatctgtgtgaggtgctgctctacctgttactacctcctggagacttccac
aacaagaacatgagatacttcctcagggagattctggcgcgaggcgttctccttcccctg
gtcaaccagctgagtgatcctgattacatcaaccagtttgttatctggatgatccgggac
tctagctgtaactacgaggcttttatgaacatcttgaagctgacagacagagtgtctgaa
ctggaggctgttaaagacaaggccctggaggaactacagtacctacgatcactggacacc
gcaggagacgatatcaatgtaataaagaaccagatcaacagtctgatgtttgtgaagaag
gtctgtgagaccaggatacagaggctacagtctgggaaggaggtggatgctctgaaacta
gcggcaaacttgggcaagctgtgcatcataccactggagcacattctggtacacaacatt
gccctgcagttctttatggactacatgctggtggctggggcccaggcagagctgttcttc
tggctgacagtggagggctacagagtaacagcccagcaacaactagaggtgatggaggga
tggcagaaggatggaaggaagggaggagacactaaaggactgctgaaggctgcagcacta
ggggtgtatgaacagtacttatctgataaggcgtcccccagggtgcaggtagatgaggcg
tctgttctccaactgggagagaagctgcagaaggacagcgaccccacaccagagatattc
aacgacatccagaccacggtgtatgacatgatgcttcgtgatgagaggttttacccgtcg
ttcagacagagtcctctctacatcaggatgttagctgagctggacatgctcaaagaaccc
tcctatagaggatcggatgacggagacggagaatcgttcaacggttctccaacaggaagt
attaatctgtctctggatgacctgtcgaactcctgccatgatgacaatatacagctacac
gccttcatctccgatacaggggtgtgtaacgaccacggcaagacctacgccctctacgcc
atcactgtgttgcgccgtaaccacgacggcagcgaagactcctggaagacctaccgacgc
tactctgacttccacgatttccacatgaggatcacggagcaggtgaagtttgagaatttg
acggcgatcctgaagctgccggggaagaagacgtttaacaacatggacagagacttcctg
gagaggaggaaaaaagacctgaactcgtacctacagctgctgctgaatccagagatgatg
aaggcctgtcctactctggttcactacgtctacgacttcctggagaataaacagtacagc
aaggggaagggggatttcgctcgcaagatggatacgtttgtgaacccgctgcggagctcg
atgcgtaatgtgtccaacgctgtgaagggcctgccagacagtctggctggagggatgaac
aaggctgctgacaacatgggacgcatgtcagagaaactgggacaggacataaaacaggct
gtgttcaaggtgcctccaatgctccccaagtctgactttgacccagagcactgccgagtc
tcggcccagctggatgacaatgtagatgataacnatcccctgcgtgtgatgctgctgttg
atggatgaggtgtttgacctgaaggagaggaaccagtggctccgcaggaacatcaagaac
cttctgcagcaactcatcagagccacatacggagacactatcaacaggaagatcgtggat
catgtggacttcatgacagctccagaacaggtggccgactacgtcaagaagttccgggat
tcgtactggcccaacggaatcctggccgagtctccaccacgcagggacaagaacatccgc
atgaggacgagggtcgcggccaagaccaacctattgggaatcatgccagatgagttgaag
cacatcatcggggcggatacgactcgtaagggaatcctgcgtgtgtttgacatgttccaa
cacggaccaatgaatcgtcggctggtctacgtgctcctagaaggcttcctggagaccatg
ttccctcactacaagttccctgagctgtttgttaaactccactctcgctcgccgcgcaca
gccagatacacacagaaagtcaagagcaccttcccgaagaggtga
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