Oncorhynchus tshawytscha (Chinook salmon): 112239717
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Entry
112239717 CDS
T05605
Symbol
zswim2
Name
(RefSeq) E3 ubiquitin-protein ligase ZSWIM2
KO
K15716
E3 ubiquitin-protein ligase ZSWIM2 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112239717 (zswim2)
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112239717 (zswim2)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112239717 (zswim2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
SWIM
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
112239717
NCBI-ProteinID:
XP_042175384
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MFRKTVWKNTVSDAVSWHQDEALNTTMFILKEYGPTGFLLKEEGEPKNFKVFLGDPHTCT
CSTFHKEKDLCKHICWVLLRKFRLPREHEYCFQQVLVERQILELLQGLHRSRTPRPVHPP
CSEADPNPRPDPAEGYGGVRQKEIEAEDVCPICQEELLGKRLPVSYCRFGCGNNIHISCM
KVWADHQARPEGEGEAMVKCPLCREDFGPVKLLLEQVRNVAKLHTAAERERPDRHLGVLC
NNCRVCPITGKCFKCTVCRYYHLCEDCIRRCCHPQHAFAIRTKRTAKWLSLGQCVFNTLG
EPHEMTTQSVGDSMIPVESDPLPEHLVRSLLLVRVRRGCPLLDPGQQCRICLKSFQQGQQ
ARHLPCHHKFHTDCVDPLLRRSNSCPLDGYVIYNPLTWSSSGGKGTPKLASSLDHPKLTE
QHRLELFVPGVALLDRAARVVPSLSMFSSEGSADALVPLPQDTMVVGLQGLRINTVNIES
MEGGKSRTEKDGTPVKSVILNKSLSSQHLRTDVSRVRLGRTKSSSSTKSLAQNNATSTNR
LGGVYGGTGRAQPSLFVGVNRSDRDMTAAAQTRAVITLWRARPQWKLRPRVPRPSTGDSQ
QATGLRMTGVLINAPHQGEKE
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggaaaactgtctggaagaataccgtgagtgatgccgttagctggcaccaggac
gaggccctgaacacgaccatgttcatcctgaaagagtatggtccgaccggattcctactc
aaagaggagggggaacccaaaaacttcaaagtgttcttgggagaccctcatacatgtacc
tgttcaacattccacaaagagaaagacctctgcaaacacatctgctgggttttattgcgg
aaattccgactgcctagagaacatgaatattgcttccagcaggtcctggttgaaaggcag
atcctggagctgctacagggtttacacaggagcagaaccccccggcctgtacacccaccc
tgctctgaggctgaccctaaccccagaccagacccagctgaggggtacgggggggtcaga
cagaaggagatcgaagccgaggatgtgtgtcccatctgtcaagaggagttgctggggaaa
cgtctgcctgtgtcttactgcaggtttggctgtggcaacaacatccatatctcctgtatg
aaggtgtgggcagaccaccaggcacgtccggagggggagggggaagccatggtgaagtgc
ccgctgtgccgggaggactttgggccggtcaagctgctcctggagcaggtgaggaatgtg
gctaagctccacacagctgctgagagagagaggcccgacagacacctcggggtgctctgc
aacaactgcagggtctgccccatcactggcaagtgcttcaagtgcacagtctgccggtac
tatcacctttgcgaggactgtataagaaggtgctgtcaccctcagcatgcgtttgccata
cgtacaaaaaggactgcgaagtggctttccttgggtcagtgtgtgttcaacacactgggt
gaaccacatgagatgaccactcagtcagtgggtgacagcatgattcctgttgagagtgac
ccactgccagagcacctggtcaggagcctccttttggtcagggtgaggagaggctgcccc
ctgctggaccctgggcagcagtgtaggatctgcctgaagagcttccagcaagggcagcag
gccagacacttgccctgccatcacaagttccacacagactgtgtcgacccgttgcttcgg
aggtccaactcctgtcctctggacggatacgtcatctacaaccccctaacatggagcagc
agtggggggaagggaacacccaagctggcctcctcccttgaccatccaaagctcacagag
cagcacagactggagctgtttgtcccaggagtagctctgctggacagagcagccagagtg
gttccctccctgagtatgttcagctccgagggctcagctgatgccctagtacctctccct
caggacactatggttgtcggcttacaaggtctacgcatcaatacagtgaacattgagagc
atggagggtggaaaaagcaggacagagaaagatggaactccagtcaaatcagtcattctc
aacaagagcctttcctcccagcatctaaggacagacgtgtctagagtgaggttgggacgc
accaagtcaagctcctcgaccaagagtttggcccaaaacaatgctacctcaactaacagg
ctgggtggggtctatggaggaacgggaagggcccagccgagtctgtttgtgggtgtaaac
aggtcagacagggatatgactgctgctgctcagaccagagctgtcatcaccctgtggaga
gccaggccccagtggaagctgagacccagggtacccagacccagtacaggagacagccag
caagccacaggcctgaggatgacaggggtactgatcaatgctccacaccagggagaaaag
gagtga
DBGET
integrated database retrieval system
