Oncorhynchus tshawytscha (Chinook salmon): 112239724
Help
Entry
112239724 CDS
T05605
Name
(RefSeq) desmin-like isoform X1
KO
K07610
desmin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112239724
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112239724
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
112239724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Mis14
DUF7491
KASH_CCD
GAS
DUF4200
Baculo_PEP_C
TolA_bind_tri
CENP-F_leu_zip
CCDC92
WXG100
DUF1664
MAD
KLRAQ
Motif
Other DBs
NCBI-GeneID:
112239724
NCBI-ProteinID:
XP_042175965
UniProt:
A0AAZ3RB18
LinkDB
All DBs
Position
LG03:complement(77698747..77726356)
Genome browser
AA seq
505 aa
AA seq
DB search
MSKSFSSQSAQSASSYRRTFGSGIGSTPGMSSMFSHGGRGSSGSSGSAHMSSRVYEMTKS
SARPSYSSGSIRSSSGGAMRSYAGMGEKLDFSLADATNRDFLDTRTNEKAELQHLNDRFA
SYIEKVRFLEQQNATLVVEIERLRGHEPTRVAEMYEEEMRELRRQVDGMSNDRARMEVER
DNLADDLQKLKLRLQEEIHQREEAENNLSAFRADVDSATLARLDLERRIESLQEEIAFLK
KIHEEEIHEMTSQIQETSVQVQMDMSKPDLTAALRDIRMQYEGIAAKNISEAEDWYKSKV
SDLNQAVNKNNDALRQAKQESMEFRHQIQSYTCEIDSLKGTNESLLRQMREMEDRLGNEA
GGYQDSVTRLEAEIAKMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITVSG
SHSAAHSASHSAAHSAASSYSTIGFRETSPDVGRSSEVHSKKTVLIKTIETRDGEESPFE
TLSLLEESPVSQKKKKKSRKKQGGQ
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtccttctcctcccagtccgcccagtcagcctcttcctaccgccggaccttc
ggttctggtattggatccaccccaggcatgtcctccatgttctcccacggtggacgcggc
tcctccggctcctccggctcggcccacatgtcctccagagtctacgagatgaccaaaagc
tccgcccgccccagctactcctccggcagcattcgttcctcttccggcggcgcgatgcgc
tcgtacgccgggatgggcgagaagctggacttcagcttggccgacgccacgaaccgtgac
ttcctggacaccaggaccaatgagaaggcagagctgcagcacctgaacgaccggttcgcc
agctacatcgagaaggtccgtttcctggagcagcagaacgctactctggtggtggagatc
gagaggctgaggggtcacgagccgacccgcgtggccgagatgtacgaggaggagatgaga
gagctgaggcgtcaggtggacggcatgtccaatgacagagcccgcatggaagtggagaga
gacaacctagcagacgacctgcagaaactcaaactcagactgcaggaggagatccaccag
agggaagaggcagagaacaacctgtctgccttcagagctgacgtggactctgccactctg
gccaggctggacctggagagacgcattgagagtctacaggaggagatcgccttcctcaag
aagatccacgaggaggagatccatgagatgacgagccagatccaggagacctcggtgcag
gtccagatggacatgtccaaaccagacctgaccgctgccctcagggacatccgtatgcag
tacgagggcatcgcagccaagaacatctccgaggcagaggactggtacaagtccaaggtg
tcagacctgaaccaggctgtgaacaagaacaatgatgctctgagacaggccaaacaggag
agcatggagttcaggcatcagatccagtcctacacctgtgagatcgactctctcaaggga
accaacgagtctctgctgaggcagatgagggagatggaggatcgtctgggaaacgaggct
ggaggttaccaggactccgtcacccgtctggaggctgagatcgctaagatgaaggatgag
atggctcgtcacctcagagagtaccaggacctcctcaatgtcaagatggccctggatata
gagatcgctacctacaggaagctactggaaggagaggagagccgcatcactgtatctggc
tcccactccgctgctcactctgcctctcactctgctgctcactctgctgcctcatcatat
tccactattggattcagagagaccagcccagacgtagggcgttcatcagaggtccactca
aagaagactgttctgatcaagaccatcgaaacccgcgatggagaggaaagtccctttgag
actttgtctcttttggaagagagccctgtctcacaaaaaaaaaaaaaaaaaagcagaaaa
aaacaaggtggtcagtga
DBGET
integrated database retrieval system
