Oncorhynchus tshawytscha (Chinook salmon): 112239743
Help
Entry
112239743 CDS
T05605
Symbol
hgs
Name
(RefSeq) LOW QUALITY PROTEIN: hepatocyte growth factor-regulated tyrosine kinase substrate
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03250
Viral life cycle - HIV-1
otw04144
Endocytosis
otw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112239743 (hgs)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112239743 (hgs)
04145 Phagosome
112239743 (hgs)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112239743 (hgs)
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
112239743 (hgs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
ELMO_ARM
UIM
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
112239743
NCBI-ProteinID:
XP_042173524
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MGKGGGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAIGAIKKKLMDKNPHV
ALYGLEVLESVVKNCGQTVHDEVACKTTMEELKDLLKTEPNVRNKILYLIQAWAHAFRNE
PKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHLLPGSVWRMTGKHHC
RACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCHELLNKKAEGGKPVGTSTSVTPGPAEL
PPEYLTSPLSQQSQVPPKRDEAALQEEEELQLAIALSQSEAEEKERMRQKNSYGVYPKAD
PAPVTSSAPPVNSLYSSPVNSSAPSAEDVDPELARYLNRTYWEKKQEEARKSPTPSAPAP
VPLATEPLPISQPQPVETVAPLPAPVVMAPPPVNIVEQYQNGESEENHDAFLKALQNAVT
TFLNRMKSNHMRGRSITNDSAVLSLFQSINTMHPQLLDILNQLDEKRLYYEGLQDKLAQV
RDARAALNALRDEHREKLRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEMQRQLAIQRLQ
EQEKERQMRLEQQKHTIQMRAQMPAFPMPYPQMQSLPPNVAGGVVYGQPGGPPSYPGTFS
PSGSVEGSPMHNVYMNQPGPGQYQAMPPDPNMYMYQPAGTNGQPAPPGQAPPTTSPAYSN
YQPTPTQGYQNVVSQAQSLPPMSQAQSLPPMSQPPPTNGMSYVAYPPPYAMQSMMAALPG
QDPNMPPQQPYMQGPGQQPMYQQMAPPGGPQQQVQQQQPPQVHPGSEAQLISFD
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagggtggtggtacatttgagaggcttcttgataaagcaaccagtcagctgctg
ctggagacagactgggagtccatcctgcagatctgtgatctcattcgtcaaggagacaca
caggcgaagtatgccatcggagccattaagaagaagctgatggataagaacccgcatgtg
gccctttatggtcttgaggtgttggagtcagtagtgaagaactgtggtcagacggtccat
gatgaggtggcctgtaaaaccaccatggaggagctgaaggatctactgaagacggagccc
aacgtgaggaataagatcctttacctgatccaggcctgggcccacgccttccgcaacgag
cccaaatacaaggtggttcaggacacgtaccagatcatgaaggtggagggtcacgtgttt
ccagagttcaaggagagtgacgccatgtttgctgcagagagagctccagattgggtggat
gcggaggagtgtcatctgctgccgggttcagtttggaggatgactggaaagcaccactgt
agagcctgtggtcagatcttctgtggaaagtgttcctccaagtactccaccatccccaag
tttggaatcgagaaggaagtgcgtgtgtgtgagccctgccatgagctgctcaacaagaaa
gctgaagggggtaaacccgtcgggacatccacgtccgtgaccccaggcccggcagagctg
cccccagagtacctgaccagccccctgtcccagcagtctcaggtgccccccaaacgggac
gaggcggccctgcaggaggaggaggagcttcagctggccatcgccctatcacagagcgag
gctgaggagaaggagaggatgagacagaagaactcgtacggggtctaccccaaagctgac
cccgccccagtcacctcctcagccccgcccgtcaactcactctactcctctcctgtgaac
tcatctgctccctcagctgaagatgtcgaccctgagttggctcgctacctgaacagaacg
tactgggagaagaaacaggaagaggcacgcaagagtcccaccccctctgcccctgccccc
gtaccattggctactgagcccctgccaatcagccagccccagccagtggaaacggtggca
ccactcccagcaccagtcgtcatggcccctcctccagtcaacatagtggagcagtatcag
aacggtgagtcggaggagaaccacgatgcgttcctgaaggctctgcagaacgcggtcacc
accttcctgaaccgtatgaagagtaaccacatgcgcggtcgcagcatcaccaacgacagc
gccgtgctctccctcttccagtccatcaacaccatgcacccccagctactggacatcctc
aatcagctggacgagaagagactgtactacgagggtctgcaggacaagctggcccaggtg
cgtgatgcgagagccgccctgaacgccctacgagacgagcacagagagaagctgcgtcgt
gctgccgaggaggcggagagacagagacagatccagctggcccagaaactagagatcatg
agacagaagaaacaggagtacctagagatgcagcgtcagctggccatccagcgactccag
gagcaggagaaggagagacagatgaggctggagcaacagaaacacaccatccagatgaga
gcccagatgcctgccttccccatgccctacccacagatgcagtctttgccccccaacgtg
gcaggaggggtggtgtacgggcagccggggggaccccccagttacccaggcacctttagc
ccctcagggtcagtggaggggtcgcccatgcacaacgtctacatgaaccagcctggacca
ggacagtaccaggccatgcctccagaccccaacatgtacatgtaccagcctgcaggaacc
aatgggcagcctgcaccccctggccaggccccgcccactactagccccgcctactctaac
taccagcccacacccacacagggataccagaacgtggtgtcccaggcccagtctctgccc
cccatgtcccaggcccagtctctgccccctatgtcccagcctcctcccactaacggtatg
tcctacgtggcctaccctccaccctacgccatgcagagtatgatggcagccctacctggg
caggaccccaacatgcccccacaacaaccctacatgcagggcccaggacaacagcccatg
taccaacagatggctccccctggtggcccccagcagcaggttcagcagcagcagcctccg
caggtccatccaggcagcgaggcacagctcatctccttcgactga
DBGET
integrated database retrieval system
