Oncorhynchus tshawytscha (Chinook salmon): 112239765
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Entry
112239765 CDS
T05605
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112239765
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112239765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
ERM_helical
Ig_mannosidase
Motif
Other DBs
NCBI-GeneID:
112239765
NCBI-ProteinID:
XP_024263949
LinkDB
All DBs
Position
LG20:3854884..3997032
Genome browser
AA seq
1093 aa
AA seq
DB search
MDDKASVGKISVSSDSVSTLNSEDFVLVSRLGDDTPGSSTNNGSDDEKTGLKVISEEGVS
FKIVGNGSEQQLQKELEDVLMDPSVAEQALGGGIPSGGGVDQAGGVDHVFSPTMAAPPEP
QPCLDPLGTPPKVEMVLPVQSAAQESELNERSYRGDESSSECSPSTPIPDEDSVVFNKLT
YLGCASVNAPRSEVEALRMMTILRGQCQLPLDVTLSVPGVSEGTVRLLDPQTSTEIASYP
IYKILFCVRGHDSTPESDCFAFTESHYNAEIFRIHVFRCEIQEAVSRILYSFATAFRRST
KKTLLSGLAPPLTPDSDVFTFTVSLEIKEDDGKGTFSAVAKDKDKNSFKLRPGMDKKIVI
YVQQTSNKELAIERCFGLLLSPGKNVKNSDMHLLDLESMGKSSDGKSYIITGSWNPNTPQ
FQAVNEETPKDKFMYMTTAVDLVITEVEEPVRFLLETRVRVCSPNERLFWPFSKRNYTET
YYLKLRQMERKSNNDTLYEVLSLESESERERKKTTASPNILQSSSHGSMVPSPPEDDEEE
DNDEPLLSGSGDVSKECAEKILETWGDLLSKWHLNLSVRPKQLPALVRSGVPEALRGEVW
QLLAGCHNNDHQVEEYRTLITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICK
AYSVYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFF
QLERLMQEYIPDLYNHFLNVGLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVI
FNVALALLKTSREDLLATDFEGALKFFRVPVPKRYRSEENAKKLMELACSMKISQKKLKK
YEKEYHAMREQQEQQEAPIERYERENRRLQEANMRLEQENDDLAHELVSSKIALRKDLDN
AEEKADALNKELLMTKQKLVDSEDEKRRLEEESAQLKEMCRRELDKSESEIKKNGSIIGE
YKQICSQLSERLEKQQAANKGELEKIRLKVEGCEKCSILFSKEGRLKAARKLKEGSEEET
DEEKEALKNQLREMELELAQTKLQLVEAECKIQDLEHTLGLALNEVQAAKKTWFNRTLTS
IKTATGAQGKETT
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaggcctcggtggggaaaattagcgtgtcgtccgactccgtgtccaccctg
aacagtgaggactttgtgctggtgtcgcggctgggggacgacaccccaggctcctccact
aataacggtagcgatgacgaaaagaccggactgaaggtgatttctgaggaaggggtcagc
tttaagattgtggggaacggcagtgagcagcagttgcagaaggagctggaggatgttctg
atggacccctctgtagctgagcaggcgctgggtggtggcatccccagtggtggcggcgtg
gaccaggcaggcggggtagaccatgttttctcccccaccatggcagcaccacccgagccc
caaccgtgccttgaccccctcggcaccccgcccaaagttgagatggtgctccccgtccaa
tctgcagcgcaggagagtgagctgaatgaacgatcttaccgcggggatgagtcgtcatcg
gagtgcagccccagtacgcccatcccagacgaggacagtgtggtctttaataagctgacc
tacctgggctgtgcctcggtcaacgctccccgcagtgaggtggaagcgctccgtatgatg
accatactcagagggcagtgccagctacccctggacgtcaccctgtctgtgcctggagtc
tcagagggcaccgtcaggttgctggacccccagacaagcacagagatagccagctacccc
atctacaagatcctgttctgcgtgcggggtcacgacagcacaccagagagtgactgcttc
gccttcacggagagccattacaacgcagagatcttccgcatccatgtcttccgttgtgag
atccaagaggcggtcagcaggatactgtacagcttcgccacggcctttaggcggtccacc
aagaagacgctcctctcgggcttggctccgcccctgactccagacagcgacgtcttcacc
ttcaccgtcagcttggagatcaaggaggatgatggcaaagggacctttagtgctgtggcg
aaagacaaagacaagaacagcttcaagctgcgtccgggaatggacaagaagatcgtcatc
tacgttcaacagacgtctaataaggagctggccatagagaggtgcttcggcctcctgctg
agtccagggaagaacgtgaagaacagtgacatgcacctgcttgacctggagtcgatgggg
aagtcctctgatgggaagtcctacatcatcacagggagctggaatcccaacacacctcag
ttccaggctgttaacgaggagacacccaaagataagttcatgtacatgacgacagcggtg
gacctggtgatcactgaggtggaggagccggttcgtttccttctggagaccagggtcaga
gtctgctctcccaacgagaggctattctggcccttcagcaaacgcaactacaccgagacc
tactacctgaaactcagacagatggagcgtaagagtaacaatgataccctgtacgaggtg
ctgagcctggagagtgagtcagagagggagaggaagaaaaccacagccagccccaacatc
ctgcagtcttcctcccacggctccatggtgccatcgcctcccgaggatgatgaggaggaa
gacaatgacgagccgttgctgagtggctcgggagacgtgtcaaaggagtgtgctgagaag
atcctggagacctggggagacctgctgtccaaatggcacctgaacttgtcggtgcgtccc
aagcagctcccggcgttggtacgtagtggcgtaccagaggccctcaggggagaggtatgg
cagctcctggccggttgccataacaatgaccaccaggtagaggagtaccgcaccctcatc
accaaggagtctccccaggacagtgccatcaccagagacatcaacaggactttcccagct
cacgactatttcaaggacactggaggagacggacaagactcactctacaagatctgcaag
gcctactcagtgtatgatgaggagattggctactgccaggggcagtctttcctggctgcg
gtgctgctgctgcacatgcctgaggagcaggcctttagtgtcctggtcaagatcatgttt
gactatggactcagggagctcttcaagcagaactttgaggatctacactgcaagttcttc
cagctggagcgactcatgcaggagtacatcccagacttgtataaccacttcctgaatgtg
ggtctggaggctcatatgtacgcctctcagtggttcctcacgctcttcacagccaagttc
cccctctacatggtgttccacatcatagacctgcttctctgtgagggcatcagtgtgatc
ttcaatgtggctctggctctcctgaagacctcgcgagaagacctgctggcgactgacttt
gaaggggcgctcaagttcttccgagtcccggttcccaaacgctaccgctcagaggagaac
gctaagaaacttatggaactggcctgcagcatgaagatcagtcagaagaagctgaagaag
tacgagaaggagtaccacgccatgagagagcagcaggaacagcaggaagctcccattgag
agatacgagagggagaaccgtcgtctccaggaggctaacatgcgtctggagcaggagaat
gatgacctggcccatgaactggtcagtagcaagatcgccctgcgcaaggacctggacaac
gctgaggagaaagcagacgctctgaacaaggagctgttgatgaccaaacagaagctggtg
gattcggaggacgagaagaggcggctagaggaggagtctgcgcagctgaaagagatgtgt
agacgggagctggacaaatcagagtctgagatcaagaagaacggttccatcataggagag
tacaaacagatctgctcccagctcagtgagcgtctggagaaacagcaggcagccaacaag
ggagagctggagaagatccggctgaaagtcgaaggctgtgaaaagtgctccatcctgttc
agcaaggagggtcgtctgaaggcagcgaggaagctgaaggagggcagtgaggaggagacg
gacgaggagaaggaggctctgaagaaccagctccgagagatggagctggaactggcccag
accaaactacagctggtggaggcagagtgcaagatacaggacttggagcacaccctgggt
ctggctctcaacgaggtccaggctgctaagaagacctggttcaacagaaccttaacctcc
atcaagactgcgacgggagcacagggcaaggagaccacctaa
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