Oncorhynchus tshawytscha (Chinook salmon): 112239771
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Entry
112239771 CDS
T05605
Name
(RefSeq) sorting nexin-18-like
KO
K17923
sorting nexin-9/18/33
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112239771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112239771
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112239771
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
112239771
Macropinocytosis
Sorting nexins
112239771
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112239771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_2
SH3_9
SH3_1
Vps5
XFP
Motif
Other DBs
NCBI-GeneID:
112239771
NCBI-ProteinID:
XP_042176167
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All DBs
Position
LG04:4158249..4182588
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AA seq
591 aa
AA seq
DB search
MALKARALYEFNSENTGEISLKEHEIVSLYSEQDIEGWLEGSNSKGERGLFPASYVEILN
NDTASTFNNNSTSEDTYRGSRYANIPTGGFGDASNKTLNQIENLSKTSIISSGFTASSPL
APAQQHGYQASQGSDEDWDEDWDDTSTVADEPVVVGGSHQGDFDGNGSSTYSVSTSSMSR
SGNAQQAKSSATVSRNLNRFSTFVKSGGEAFVLGEAAGFVKDGDKICVVTGQYGPEWQEN
PYPFSCTIDDPTKQTKFKGMKSYIAYKLTPTHTQTQVNRRYKHFDWLYARLVEKFPVISV
PHIPEKQATGRFEEDFISKRRKGLIWWMNHMTSHPVLSRCDVFQHFLSCNSMDQKSWKQG
KRKAEKDEMVGANFFLTISTPSGPPLDLVEVESKIDGFKAFTKKMDDSVVQVNTTTNEFA
RKQITGFKKEYQKVGQAFNALGQAFEQDQQAYSVGLNQAIAYTGEAYDAIGDYFAEQPRH
DVDPLMDLLQLYQGHLANYPDIIHVQKGALNKVKESQKHVEEGKMDARQADGVNERCNII
SFATLAEMQHFHQVRVRDFKTQMQQYLTEQIGFFQKITGKLEEALQKYDNA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaaggcgagggctttatacgagttcaattccgaaaacacaggggagatatca
ttaaaggaacatgaaatagtgagtttgtacagcgaacaggacatcgaaggctggctagaa
ggatccaacagcaaaggcgagagaggtctcttccccgcgtcctacgtcgagatcctaaat
aacgataccgcgtccacgtttaataataacagcacatcagaggatacttaccggggatcc
cgatacgccaatattcctaccggaggtttcggggacgcctcgaataaaacattaaatcaa
attgaaaacttgtccaaaacatcaataatatcgtctgggtttacagcgtcctcgccgctt
gccccagcgcagcagcacggttaccaagccagccagggcagcgatgaagactgggatgaa
gactgggatgacacctcgacagtggctgacgagcccgtagttgttggtggtagtcaccaa
ggggactttgatggcaatggatcgtctacatatagcgtgtcaacatcttctatgtccaga
agtggcaacgctcaacaagccaagagctctgccacggtcagtagaaacctcaataggttt
tcaacatttgtgaaatcaggaggtgaagcgttcgtgttaggtgaggcagctgggtttgtg
aaagatggggataagatctgtgttgtaacgggacaatacggtccagaatggcaggaaaac
ccatacccattctcctgtaccatagacgaccccaccaagcagaccaagttcaaagggatg
aagagttacattgcctacaagctgacgcccacccacacacagacccaggtcaacaggaga
tataaacactttgactggctctacgccaggctggtggagaagttccctgtcatctcggtg
cctcacatcccagagaaacaggccacggggcggtttgaggaggacttcatctctaaaagg
aggaaagggttgatatggtggatgaatcacatgactagtcacccggtcctgtccagatgt
gacgtgttccagcacttcctctcctgcaacagcatggaccagaagtcatggaagcagggg
aagaggaaggcagagaaggacgagatggtgggggctaacttcttcctcactatctccacg
ccctccggaccccccctggacctggtcgaggtcgagtccaagatcgacggcttcaaagct
ttcaccaagaaaatggacgacagcgtggtccaagtcaacaccaccaccaacgaattcgcc
cggaaacagatcacagggtttaagaaggagtaccagaaagtgggccaggcgtttaatgcc
ctaggacaggcgtttgagcaggaccagcaggcatattcagtagggttgaaccaggccata
gcgtatacaggagaggcatacgatgctatcggagactactttgcagagcagccaagacat
gatgtggaccctttaatggatttgttacagctgtaccagggacatctggccaactaccct
gacatcatccacgtacagaaaggagcacttaacaaggtgaaggagtcccagaagcacgtt
gaggaaggcaagatggacgctcgtcaggcggatggagtcaacgagcgctgtaacatcatc
tccttcgccacgctggcagagatgcagcacttccaccaggtccgggtgagggacttcaag
acccagatgcagcagtatctaaccgagcagattggcttcttccagaagatcaccggaaag
ctggaggaggccctgcagaagtatgacaacgcttag
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