Oncorhynchus tshawytscha (Chinook salmon): 112239835
Help
Entry
112239835 CDS
T05605
Symbol
rhot1a
Name
(RefSeq) LOW QUALITY PROTEIN: mitochondrial Rho GTPase 1-A
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112239835 (rhot1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112239835 (rhot1a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
otw04031
]
112239835 (rhot1a)
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
112239835 (rhot1a)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
112239835 (rhot1a)
GTP-binding proteins [BR:
otw04031
]
Small (monomeric) G-proteins
Rho Family
Miro
112239835 (rhot1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
Arf
EF-hand_7
EF-hand_1
RsgA_GTPase
MMR_HSR1
AAA_16
AAA
ABC_tran
AAA_22
AAA_14
G-alpha
Pox_A32
EF-hand_8
AAA_25
AAA_5
Motif
Other DBs
NCBI-GeneID:
112239835
NCBI-ProteinID:
XP_042163152
LinkDB
All DBs
Position
LG27:14658682..14691374
Genome browser
AA seq
704 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVSEEFPDDVPLRAEEITIPADVTPERVPTHIVDYSE
AEQSDEQLYQEISKANVICIVYSVNNKKSIEKVTSHWIPLINDRTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNQYSDIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKE
MKPSCIKSLTRIFKVSDLDNDGILNDKELNFFQRTCFNMPLAPQALEDVKNVVRKNMTDG
VEDNGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELHQEYLFPLLKIPADCTTE
LNHNAYLFLQSVFDKHDKDRDCALSPEEVKDLFKVFPYMPWGPDVNNTVCTNDQGWITYQ
GYLSQWTLTTYLDVQRCLEYLGYLGYSIICEQESQAAAITVTRNKRIDLQKKQTQRSVFR
CNILGARGSGKTSFLQAFLGRNLLKQRKIREDHKSFYSINTTYVYGQEKYLLLHEVMPDF
DFLSEEDLACDVVCLVYDVNNPRSFEYCAKVYKQYFMDSKTPCMMIASKSDLHEARQHYS
LTPLDFCRKNKLHPPQPWTCNTVDAPNKDLYTKLTTMAMYPHAKLRCMCTCNRCTFCICQ
NILRSQLLTNIKAKFYSVVLNRLHDVGAYLLADEECSLIQQVHAISNVEESIYMESSVQP
YGPQARHMAQADLKSSTFWLRASVGATVFAVLGFAMYRAILKQR
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggacgtgaggatattactcgttggggaacccaaagtggggaagacgtctctg
atcatgtcactggtcagcgaggagttccctgacgacgttccccttcgagcggaggagatc
accatcccagcagacgtaactccagagagagtccccacacacatagtggactactcagaa
gcagaacagtcagacgagcagttgtatcaagaaatatcaaaggcaaatgttatttgcata
gtttactcagtcaacaacaagaagtccattgagaaggtgacaagtcattggattcccctc
ataaacgacaggacggacaaggatagcagggtaccactgatcctggtggggaataagtca
gacctggtagaacacagcagtatggagaccatcctgcccatcatgaaccagtactctgac
attgagacctgcgtggagtgctctgccaaaaacctgaagaacatctcagagctgttctac
tatgcccagaaggcagtgctccaccctacaggacccctgtactgcccagaggagaaggag
atgaagccgtcttgcatcaagtctctaactcgcatcttcaaagtgtcggacctggacaac
gatggcatcctcaacgacaaagaactcaacttcttccagaggacgtgtttcaacatgccc
ctggcgccccaggccttagaggatgtcaagaacgtggtgaggaagaacatgacggacgga
gttgaggacaacggactcacgctcaaagggttcttgtttctgcacacgcttttcatccag
agggggcgtcatgagaccacctggacggtgctgcggaggtttgggtacgacgacgacttg
gagcttcaccaggaatacctgttccccctgctaaaaatacctgctgactgcaccaccgag
ctcaaccacaacgcgtacctcttcctccagagtgtcttcgacaagcacgacaaagacaga
gactgtgccttgtctccagaggaagtcaaggacctgttcaaagtgtttccctacatgcct
tggggccccgacgtcaacaacaccgtgtgtaccaacgaccagggctggatcacctaccag
ggttacctgtcacagtggacgttaacgacgtacctggatgtgcagcgctgcttggagtac
ctgggctaccttggctactcaatcatctgtgagcaggaatcccaggcagcagccatcaca
gtgacccgtaacaagcgcatcgacctgcagaagaagcagacgcagcgcagcgtgttccgc
tgtaacattctgggagccagggggagtggcaagaccagcttcctgcaggcctttctgggt
cgcaacctgctgaaacagcggaagatcagagaagaccataaatcgttttactccatcaac
accacgtatgtctacggccaggagaagtacttactgcttcatgaggtgatgccagacttt
gacttcctctcagaggaggacctggcgtgtgacgtggtctgtctggtgtatgacgtcaac
aacccgcgctcctttgagtactgtgccaaggtctacaagcaatacttcatggacagcaag
acgccgtgcatgatgatcgcctccaagtcagacctgcacgaggcgcgccagcactacagc
ctgaccccgctggacttctgccgcaagaacaagctgcacccgccccaaccctggacctgc
aacacggtggacgcccccaacaaggacctctacaccaaactcaccaccatggccatgtac
ccccacgccaagctccgctgcatgtgtacctgcaacaggtgtaccttctgcatctgtcag
aacatcctccggtcccagctactgacaaatataaaggccaaattctacagtgttgttctg
aacaggttacatgatgttggagcctatctgttggctgacgaggagtgcagtctgatccag
caggttcacgccatcagtaatgtagaggagtctatctacatggagtcttctgtccagccc
tatgggccccaggccaggcacatggctcaggcagacctgaagagctctacgttttggcta
agggcaagcgtgggggcaaccgtgtttgcagtcctgggcttcgctatgtacagagctatc
ctcaaacaacgatga
DBGET
integrated database retrieval system
