Oncorhynchus tshawytscha (Chinook salmon): 112239876
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Entry
112239876 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor coactivator 2-like
KO
K11255
nuclear receptor coactivator 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112239876
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
112239876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
SRC-1
Nuc_rec_co-act
DUF4927
PAS
PAS_3
PAS_9
NCOA_u2
HLH
Motif
Other DBs
NCBI-GeneID:
112239876
NCBI-ProteinID:
XP_042154642
LinkDB
All DBs
Position
LG16:5813905..6045106
Genome browser
AA seq
1608 aa
AA seq
DB search
MSGVGENLSDPAARAESRKRKECSSDLLGPSLKRSNEKRNREHENKYIEELAELIFANFN
DIDNFNVKPDKCAILKETVKQIRQIKEQEKAAAANEEEVQKADISSTGQSVIDKEALGPM
MLEALDGFFFVVNMEGNIVFVSENVTQYLLYNQEELMNTSIYSVLHVGDHAEFIKNLLPK
SLVNGVPWSNEGPRRNSHTFNCRMLVNPHSDNRDETNDHEGQKQKYEAMQCFAVSEPKSI
KEEAEDFQSCLICVARRMPMKAGPILPXHESFTTRQDLQGKITSLDTSLLRASMKPGWED
LVRTSIQRFHLQNDGEMSFAKRHQQEVLHHGQAFSPIYRFSLSDGTIVSAHTKSKLVRSP
ATNEPQLYMSLHLLQREQSRSDLGPGQDMGPGGQGPGISPNPSITPPTQGTLSGLGPQGQ
DTTISSNNTFCSPPHGSPGSREPGLGAMGPGSREPGLGPMGPGSREPGLGAMGPGSREPG
LEPMGPGSEHIQDYHYGCPPQPMGHSGGLQGGMNLPIHPNQQGANWRMSSPSRSSPSPAG
GPHLGQQISMLSPRHRASPGMAGSPRVAPSLHSPSPVGMCGSGTGVAVGGSGPAANSHAN
SHANSHANSHANSHDNSHANIHANSHANSHANSHANSHSYGSSSLSALQALSECHGVRQG
SGGHTHPHGAGGQHPQTHALGSPDRKTMGSPAGVALGSGVNPHTMSKLGGGKGNGDSLGG
EQEHGQGGQYDQRHTDGNGTHGNHADITEERDGLDGGPDAQNRRQRCDNKGHTKLLQLLT
TKSQPLDTPLSPNGGGDPKDPSSGXGGPYAPGAPGGHATSLKDKHKILHRLLQNSTSPVD
LAKLTAEATGRELGEQGGCGNRQTGHGTDGNLTPKQEPLSPNKKDNALLRYLMDKEESGM
KARQAKTEGAGGQVKTEKQDSGYDRAEQSSELDEILDELQCVQPSSLPSSLDKQTIINDI
LHITQETSPGNPNAMATQQQQRGMQRGMGPGNYGCPGGQGPGRGLPLRSVSLDMNMSGGR
PPQGQYPPMRTPSPYTLQQQQGILGNHAAMMSNQSNLAGLVSGPRQGMQHQQEEGGWGPG
GPGQSGSASVPPPGAPGQQGTMHSRMGPNPGGPGGLMRPSSLPGPAPRQMLQSQMMVNEM
GMRAHQFSQQQAPPNQTAPWPDSMIPIEAFNQNRSVYAPQQEEVLCGGPGPGGQGTGGPG
EGGSSDEGALMSQLYTVLKDFDGLEEIDRALGIPTLMGQGQSVDQDQFSSDPSMLLDQKP
SGYGQQDPPPGSHLAQRGYHDPGSGRPMQDPPPGSHLAQRGYHDPGSGRPMQDPTGQGFH
PMAGQMSPRPGYPIMRMQQRPGLRPQGVVPNQPNTLRLQLQHRLQNRQPMMIQMSGVSNM
NPTLQSNNPNQGTINAQMLAQRQRELLSNHLRQRQLEHQRQQQQQQQQQQQRNMVMRAQG
LNLPPNMAAANMAAASGQSGGLSNPRIPQTTNPQQFPFPPSYGMSQQPDGGFGGPTTPQS
PLLSPRMAHAQSPIMQQQGQGNAAFQGLPDINGWPPQGEMGGNSMFSTQQSPPQFTQQQT
NGGAAMYNGNGMNHNVSMATNASMGQMAGQMDITSPEITSMGQEPKYC
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgtcggtgaaaacctctcggaccctgctgccagggccgagtcacggaaacgc
aaagaatgttcctctgacctactgggtcccagcctcaaacgaagcaacgagaagagaaac
cgcgagcatgagaacaagtacattgaggagctggccgagctgatcttcgccaacttcaac
gacatcgataacttcaacgtcaagcctgacaaatgtgctattctcaaggagactgtcaaa
cagatacgacagatcaaggagcaagagaaagcagcagcagccaatgaggaggaggtacag
aaggcggatatctcatcaacgggccaatccgtcatcgacaaggaggctctcggaccaatg
atgctggaggccctggatgggttcttcttcgtggtgaacatggaggggaacattgtgttt
gtgtctgagaacgtgacccagtacctgctgtataaccaggaggagctgatgaacaccagc
atctacagcgtcctgcacgtaggagaccacgctgagttcatcaagaacctgctgcccaag
agcctggtgaacggggtgccgtggtccaatgaaggtcccaggaggaacagtcacacgttt
aactgtcgaatgctggtcaaccctcacagtgacaacagggacgagaccaacgaccatgag
gggcagaaacagaaatatgaagccatgcagtgtttcgctgtctccgaacccaagagcatc
aaggaggaggcagaagacttccagtcatgtctgatttgtgtggctcgcaggatgcccatg
aaggcggggccaattcttccgncgcacgagagcttcaccacccgccaggacctgcaaggt
aagatcacgtcactagacaccagtcttctgagagcctctatgaagcctggctgggaagac
ctggtgaggacaagtatccagaggtttcacctacagaacgacggagagatgtccttcgcc
aagagacaccaacaagaggtgttgcatcacggccaggcattcagccccatctacaggttc
tctctgtcagacgggaccatcgtgtcggctcacaccaagagcaagctggtccgctcccct
gccaccaacgaacctcagctctacatgtctctacacctgctacagagggaacaatccagg
tctgatctgggcccgggtcaagacatggggcccggtggacaggggccagggatcagcccc
aacccttccataacccctccaacccaggggaccctctctggtttgggcccccagggacag
gacactacaatcagctccaacaacacattctgttcccctcctcatggaagtccagggtcc
agagaaccagggctcggagccatggggccagggtccagagaaccagggctcggacccatg
gggccagggtccagagaaccagggctcggagccatggggccagggtccagagaaccaggg
ctcgaacccatggggccagggtcggaacacatacaggactaccactacggctgccccccc
cagcccatgggccactccggagggttacagggaggcatgaacctccccatccaccctaac
cagcaaggggctaattggaggatgagcagcccgtctcgaagcagccctagcccagccgga
gggccccatctggggcaacagatttctatgttgtcccctaggcacagggcgagtccaggg
atggcagggagccctcgcgtggccccaagcctgcactcgccctcccctgtggggatgtgt
gggtctggaacaggggttgcagtaggaggtagcggtcctgcggctaacagtcatgctaac
agccatgctaacagtcatgctaacagccatgctaacagccatgataacagccatgctaac
atccatgctaacagtcatgctaacagtcatgctaacagccatgctaacagccacagctac
ggcagtagttctctgtcggcactgcaggctctgagtgagtgtcacggggtcagacaaggc
agtggtgggcacacacaccctcacggcgcagggggccagcatcctcaaacacatgccctg
ggatcacctgacaggaagacgatgggatcgcccgctggagtggcgttgggatcaggagtc
aaccctcacacgatgtcgaagcttggcggcggtaagggaaatggggactctttgggcgga
gagcaggaacatggtcagggtggacagtatgaccagagacatacggacgggaacggtacc
cacggtaaccacgctgacatcacagaggagagggatggtctcgacggtggccccgacgca
cagaaccgtagacaacgctgtgacaacaagggccacaccaaactcctccagcttctcacc
accaagtcccaacccctcgacacccctttgtcccccaatggaggaggggaccccaaggac
ccctcgtcagggnctgggggcccttacgctccaggggccccagggggccacgccacctcc
ctaaaagataaacacaagatacttcacaggctgctccagaacagcacctctcctgtggac
ctggccaagctcactgctgaggccacgggcagggagctgggggagcaaggtgggtgtggt
aacagacagacgggacacggtacggatgggaacctcacacccaaacaggagcccctgagt
cccaataagaaggacaacgccctgctgaggtatctgatggacaaagaggagagtgggatg
aaggcgaggcaggcgaagacggagggagcaggagggcaggtgaagacggagaaacaggat
tcaggatacgaccgcgctgaacagtcttcagagttggatgaaatcctcgatgagctgcag
tgtgtccagccctcctccctcccctcctccctggacaaacagaccatcatcaacgacata
ctgcacatcacccaggaaaccagccctggcaaccccaacgccatggcaacacagcagcag
cagaggggcatgcagcgaggcatggggccaggcaactacggatgtccggggggccagggt
ccaggtaggggtttgcctttgaggagtgtatccctggatatgaacatgtcagggggccgg
cccccccagggccagtatccccccatgaggacccccagcccctacacactacagcagcag
caaggcatcttgggaaaccacgccgccatgatgtccaaccagtccaacctcgcaggtcta
gtgagtggtcctcggcagggcatgcagcaccagcaggaggaagggggttggggtcctggg
ggcccgggtcagagcggttcagcctcggtccctcctcctggggccccaggtcagcagggg
acgatgcacagccgtatggggcccaaccctggaggccccgggggcctcatgagacccagc
agtctaccaggacctgcacccaggcagatgctgcagtcacagatgatggtcaacgagatg
ggcatgcgggcccaccagttctcccagcaacaggctccacccaatcagacggctccatgg
ccagacagcatgatacctattgaggccttcaaccagaacaggtctgtgtatgccccccag
caggaggaggtgttgtgtgggggtccggggcccgggggccagggaactgggggtcctggt
gaggggggttctagtgatgagggggctctcatgtcacagctctacacagtgctgaaggac
tttgatggcctggaggagatagacagagccctggggatacctactctgatgggacagggt
cagtctgtagatcaggaccagttctcttcagatccgtccatgttgttggaccagaagcct
tcaggttacggccagcaggaccccccacccggctcccatctagcccagagaggataccac
gaccctgggtccggcagacccatgcaggaccccccaccaggctcccatctagcccagaga
ggataccacgaccctgggtccggcagacccatgcaggaccccacagggcaaggcttccac
cccatggctggccagatgagccccagaccaggataccccatcatgaggatgcagcaacga
ccggggctgaggccccaaggggtggttcctaaccagcctaatacactgaggttacagctg
cagcaccggttacagaaccgccagccaatgatgatccagatgagtggagtgtccaatatg
aacccaactttacagtccaacaaccccaaccaggggaccatcaatgctcagatgttagcc
cagcgccagcgggagctgctcagtaaccacctcagacagcgccagctagagcaccagaga
caacaacaacaacaacaacaacaacaacaacagaggaacatggtgatgagagcccaggga
ctcaacctacctcccaatatggccgccgccaacatggctgctgcaagtggccaatcagga
gggctgagtaacccccggatcccccagaccaccaaccctcagcagttccctttcccaccc
agctacggtatgtcccagcagcctgacggagggtttggaggacccaccacgccccagagt
cccctgctgtcccccaggatggcccacgcccagtctcccataatgcaacagcagggccag
ggcaatgccgccttccagggcttgcctgacataaacggttggcccccgcagggggagatg
ggagggaacagtatgttcagtactcagcagtctccgccccagttcacccagcagcagacc
aacgggggcgcggccatgtacaacggcaacggaatgaaccacaacgtctccatggcaacc
aacgccagcatgggtcagatggctggacagatggacatcacctcacctgagatcacctcc
atgggacaagaaccgaaatactgctaa
DBGET
integrated database retrieval system
