Oncorhynchus tshawytscha (Chinook salmon): 112239891
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Entry
112239891 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 4B-like
KO
K19195
AT-rich interactive domain-containing protein 4B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112239891
03036 Chromosome and associated proteins [BR:
otw03036
]
112239891
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
ARID
112239891
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
112239891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
Tudor_2
Chromo
Motif
Other DBs
NCBI-GeneID:
112239891
NCBI-ProteinID:
XP_042161781
LinkDB
All DBs
Position
LG25:45659744..45840688
Genome browser
AA seq
1553 aa
AA seq
DB search
MKTPEEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKAKVTFKPDLTTVEVHDDSIQGPL
KVGAVVEVKNPDGVYQEASINKLTDCSIYTVVFDDGDEKTLRRSSLCLKGARHFAESETL
DRLPLTNPEHFGTPVIGKKGNRGRRSNPVQEEEPSSSSSEEEESDXRQNEELFGKVVCVE
GLIKDNKQILWFPHQVITPDCHEEAIIKKDSIFIRSFKDGKFNTVLRKDVRVMDTDSPPN
ADAGLKPALDEALEFVHQAAVPSSWRTEVKDESSSSEEDDDDDEEEQEEDASDEEEEEVE
PFPEERENFLQQLYKFMEDRGTPINKKPVLGYRNLDLFKLYRLVQKRGGFHDIESGSVWK
TVYQALGIPVLNSAAGYNVKCAYRKYLYGFEEYCTSCVITFRMDLPLKQPKAEGESGEAW
SGGATSVPPVASSSCGEEQKQNVSEKSSASSETSSAQPDIYKEEKTELTKDKPEAEPLKP
VQRMAEREGDDDNEEEDDCHKHESDDEDWPSFARLRVKLEPYDEEQEEGKEEDITGXVVL
SPWDWEGGGHLWVGGSLCLGLGRRRTSLGRWFSLPRTGKEEDISGSGDESCSREGDGGDE
DLGEEGEEFECYPPGMKVQVRYGRGRSLKTYQATVKDADVEGGEVLYLVHYCGWNVRYDE
WVKADKIVRPANKNVQKIKHRKKIKNKAERERNRLERLNQDLGSPSPNNLRVPRPSSKLL
GPGYGSCPGLAHELHVFSKMEDASDSSTDDIDHQDEEGDCEDEDDRPGGRCGLRKGGTPE
HVKKGGTSEHLRKGVPQNISERGVPQNISERGVPQNISERGVPQNISERVVPQNISERVV
PQNISERGVPQNISERGFRPNHLTRNGQEPINKDAPEAVKWRSQPVFEGEREGPGSSASR
KRKSEGATRERSERTPKGPLSKTKLPTRSIRNADWLSRDPRKGGGRPGEERGGGRGPGEE
RGGGRGPGEERVGPAGGGSSSSSSDDEGGAPPPTDTKQSETDREREQPSSCPKSKPSPSK
KYNGMKDKTDKRGGSGNGARPAGFWDIPEKRAKMAATVDERERQVGGGRTKGQKDVWSSI
QAQWPKKTLKELFSDSDTEAANSPPPPGTAQSFSSGLEERESKGERNGDGDEAGGGPERE
DPGTSEENQEKEEQEEFPPSGSNSVLNTPPTTPESPSMEGISSGAIAQSSGTGSNWTQPS
SPPLSTGTPALCKTPSSDPLTPGYPNPLTLRLTPGHPNPLTPGHPNPLTLGLTPGQPNPD
TPTPDPRTPQPLTPGHPNPLTLGLTPGHPNPLTPGHPNLLTPGHPNPLTPGHPNPLPGHS
ETESSTVDVESLDQDLPPVSASHKRQKEQQAGGAAKKPKPNRKSSVPPKKNNRKTAHSSD
SEDQLVGESMAKSSASKTHGAADMKGSISSKCLSQGQVEGHTPPSSQKYHKEQQHGYPDH
RAHHGRTASVYKWSVQMSDLEKMCSLERISFLQEKLQDIRNHYLSLKSEVASIDRRRKRI
KKKESESTVAASSSSSSSPSSSSLTAAVMLTLADTPVSTSSSSQNSVVSVECR
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgaagactccggaggagccgccctacctgacagtgggcactgatgtcagcgccaagtac
agaggtgctttctgtgaggccaagattaagactgccaagagactggtcaaggccaaggtg
acctttaaaccagacctgaccacagtggaggtccatgatgacagcatccaaggccctcta
aaggttggtgctgtagtagaggtgaagaaccctgatggagtgtaccaggaagcctccatc
aacaagctgacagactgcagtatatacactgttgtgtttgatgatggtgatgagaagaca
ctgaggcgttcctctctctgcctgaaaggagcacgtcactttgcagagagcgagacacta
gatcgcctccctctcaccaaccctgagcacttcggcactcctgtcatcggcaagaagggg
aaccggggacgcaggtccaatccagttcaggaggaggagccatcttcatcgtccagtgaa
gaggaggagagtgacnggagacagaatgaagagctgtttgggaaggtggtgtgtgttgag
gggttaataaaggataataaacagatcctctggttcccccaccaggtcatcaccccagac
tgccatgaagaggccatcataaagaaagacagcatcttcatccgctccttcaaggatgga
aaatttaacacagtgctgaggaaggacgtgagggtgatggacacagactcccctcctaat
gctgacgcagggctcaaaccagcgctggatgaggctctggagtttgtgcatcaggcggca
gtgcccagctcctggaggacagaggtgaaggacgagagttccagcagtgaggaagatgat
gatgatgatgaggaagaacaggaggaagacgccagcgatgaagaggaggaggaagtggag
cccttccctgaggagagggagaacttcttgcagcagctatacaagttcatggaggacaga
ggaacccccatcaacaagaaaccagtgctgggctacaggaacctggacctcttcaagctc
tacagactggtgcagaaacgcggaggcttccatgatattgagagtggatccgtatggaag
actgtctaccaggctctgggaatccctgtgcttaactctgccgccggctacaacgtcaaa
tgtgcttaccgcaagtacctgtatgggtttgaggaatactgcacctcctgcgtcatcact
ttccgtatggacctacccctgaagcagcccaaggcggagggggagagtggggaggcatgg
tcagggggagccacttccgtcccccctgtagcctcctccagctgtggagaggaacagaag
cagaatgtatctgagaaatcctcagcgagctcagagaccagcagcgctcagcctgacatc
tacaaggaggagaagactgagctgaccaaggacaaacctgaggcagaacctttgaagcct
gtgcagcggatggctgaaagggaaggtgatgatgacaatgaggaagaagatgattgtcac
aagcatgagtctgatgatgaagactggccttcatttgctcgcctcagagtgaagctggaa
ccttacgatgaggagcaggaggaagggaaggaggaggacatcacggggtaggtggttctc
tctccctgggactgggaaggaggaggacatctctgggtaggtggttctctctgcctggga
ctgggaaggaggaggacatctctgggtaggtggttctctctccctaggactgggaaggag
gaggacatctctggctctggggatgagagctgcagtcgggagggcgatggtggtgatgag
gatctgggggaggaaggggaggagtttgagtgttatcccccggggatgaaggtgcaggtg
aggtatggtcgtggtcgcagcctgaagacgtaccaggccactgtgaaagatgctgacgtg
gaggggggagaggtgctctacctggttcactactgtggctggaacgtcagatatgacgaa
tgggtcaaagccgacaagattgtccgtccggccaataagaatgttcagaagatcaagcat
cgcaagaaaataaagaacaaagcggagagagagcgcaaccgcctcgaacgactgaaccaa
gacctggggagtccgtcccccaacaacctacgtgtcccccgcccctcctccaaactcctc
ggccctggctatggctcatgtcccggcttggcccacgagctccatgtcttctccaagatg
gaggacgcctcagatagttcaacagatgacattgatcaccaggatgaggagggtgattgt
gaagacgaagatgaccgtccaggggggcgctgcggtctcagaaaggggggtaccccagaa
catgtcaaaaaggggggtacctcagaacatctcagaaagggggtaccccagaacatctca
gaaaggggggtacctcagaacatctcagaaaggggggtaccccagaacatctcagaaagg
ggggtaccccagaacatctcagaaagggtggtaccccagaacatctcagaaagggtggta
ccccagaacatctcagaaaggggggtaccccagaacatctcagaaagggggttccgcccg
aaccacctcacgcgaaatggccaagaaccaatcaacaaagatgccccggaggcggtgaaa
tggcgaagccaaccagtgtttgagggtgagagggaggggccgggtagctctgcctcgagg
aagaggaagtcagagggagcaacccgggagcggtcggaacgcacccctaaaggacccctg
tccaaaaccaagctccccacccggagcatcaggaacgctgactggctgtcgagagacccc
aggaagggaggaggaaggccaggggaggagagaggaggaggaagagggccaggggaggag
agaggaggaggaagagggccaggggaggagagagtcggaccagcaggaggaggctcttct
agtagcagctctgacgatgagggcggagcaccacctcccactgataccaaacaatcagag
accgaccgagagagagagcaacccagttcctgtccaaaatccaaaccttccccctccaag
aagtacaacggcatgaaggacaagaccgacaaaagaggcgggagtggcaatggcgcccgc
cctgcgggattctgggatattcctgagaagagggccaagatggctgctacagtggatgag
agggagaggcaggtgggtggggggcgcaccaagggccagaaggatgtgtggtccagtatt
caggcccagtggcccaagaagaccctgaaggagctgttctctgactccgacacagaggct
gctaactcccctcctccccctggaacggcccagtccttctcatcaggcctggaggagagg
gagagtaagggggagcggaacggggatggagacgaggcaggaggaggcccggagagggag
gaccctgggacctcagaggagaaccaggagaaggaggagcaggaggagttcccccccagc
ggctctaactcagtactcaacacccctcctacaaccccagagtccccctccatggagggt
attagtagtggagccattgcgcaaagctctgggactggttcaaactggactcagccctcc
tctcctcccctctccacagggacccctgcactgtgtaaaaccccttcctctgaccccctg
actccaggataccccaaccccctcactctgaggttgactccaggacaccccaaccccctg
actccaggacaccccaaccccctgactctggggttgactccaggacaacccaaccccgac
accccaacccctgaccccaggacaccccaacccctgactccaggacaccccaaccccctg
actctggggttgaccccaggacaccccaaccctctaactccaggacaccccaaccttctg
accccaggacaccccaaccccctgaccccaggacaccccaacccccttccgggtcacagt
gagacagaaagcagtacggtggacgtggagagtctggaccaggacttacccccagtgtct
gccagtcacaagcgtcagaaggaacagcaggcaggtggagcagcaaagaaacccaagcca
aacagaaagagctcagtgcctcccaagaagaacaacaggaaaactgcccacagcagtgac
agtgaagaccagttagtgggtgagagtatggctaagtcttcagcctccaagacccatggt
gcagcagacatgaaggggtccatctcctccaagtgtctcagccagggacaggttgaggga
cacacacctccatccagccagaagtaccacaaggagcagcagcatgggtaccctgaccac
agagcgcaccatggcagaacagcatccgtctacaagtggagcgtccagatgtcggacctg
gagaagatgtgtagtctggagaggatctccttcctccaggagaagctgcaggacatcagg
aaccactacctgtctctcaagtctgaggtggcatctatcgacagacgacgcaaacgcatc
aagaagaaagagagtgagagtacagtggctgcatcttcctcctcctcctcgtccccgtcc
tccagctctctaacagcagcggtgatgttgacactagctgacactcctgtgtcgacctct
tcctcctctcagaactctgtggtgtctgtagagtgtaggtga
DBGET
integrated database retrieval system
