Oncorhynchus tshawytscha (Chinook salmon): 112239899
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Entry
112239899 CDS
T05605
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2 isoform X1
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112239899 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112239899 (ppil2)
03110 Chaperones and folding catalysts [BR:
otw03110
]
112239899 (ppil2)
04121 Ubiquitin system [BR:
otw04121
]
112239899 (ppil2)
Enzymes [BR:
otw01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
112239899 (ppil2)
Spliceosome [BR:
otw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
112239899 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
112239899 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
112239899 (ppil2)
Chaperones and folding catalysts [BR:
otw03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
112239899 (ppil2)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
U-box type E3
112239899 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
U-box
Motif
Other DBs
NCBI-GeneID:
112239899
NCBI-ProteinID:
XP_042187122
LinkDB
All DBs
Position
LG12:complement(2465062..2498436)
Genome browser
AA seq
525 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTHFYGGKRSEIPKSNFRRLPFDHCSLSLQPFEYPMCTPEGIV
FDLLSIVPWIKKFGTNPISGEKLEAKSLIKLNFAKNNDGKYHCPVLYTVFTNNSHIVTNK
LTGNVFSHEAVEQLNVKTKSYRDLLSDEPFTRQDIITLQDPTNLDKFNVSDFFHVKNNLK
VLDPDEEKAKLDPGYHLNSTNMETRETLAELYKDYKGDALLASTMKEPQAKKTDKLNAAH
YSTGRVSASFTSTAMTPATEHTADAISDDTVRYSYVKKKGYVRLHTNKGDINLELYCDKV
PKAGENFTKLCKKGYYDGTVFHRSIRNFMIQGGDPTGTGLGGESFWGKPFKDEFRPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCPYLDRKHTVFGRVVGGFEALTAMENIEADPKTD
KPKSEIKLLSATVFVDPYEEADAQIAAERQKEFEKQEEDRAQTSLSQRKTKADQAPKTFK
AGIGKYINPVTATTTKRPAVEDSGPSTSGAKKVKGKTGFGDFSSW
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgtcaacatcagaaggataaaatgtacatcacatgtgctgagtacacccat
ttctatggagggaaaagatcagaaattccaaagtcaaattttcgacgtcttccatttgac
cattgcagcttgtctctgcagccgtttgaatatcccatgtgcactcccgagggaatcgtc
tttgacctgctgagcatcgttccttggataaagaagtttggcaccaatcccatctctgga
gagaaactggaagcgaagtccctcatcaagctaaacttcgccaagaacaacgatggtaaa
taccactgtcccgtcctgtacacagtcttcacaaacaactcccatatcgtcaccaacaag
ctcactggcaatgtgttctctcacgaggctgtggaacagctcaacgtcaagacgaagagt
tacagagacctgctctctgatgaacctttcaccagacaggacatcatcaccctgcaggat
ccaaccaacctggataagttcaatgtctcggacttcttccacgtcaagaacaacctcaaa
gtactggaccctgatgaggagaaggctaagctggaccctggttaccacctgaacagtacg
aacatggagaccagagagaccctggctgagctctataaggattataaaggagacgctcta
ctggcctccaccatgaaggaaccacaggccaagaagaccgacaaacttaacgcggctcat
tactctactggcagagtgtctgcttccttcacctccacagccatgacccctgctaccgaa
cacactgcagatgccatctcagatgacacggtgcgttattcctatgtgaagaagaaaggc
tatgttcgcctccacaccaacaagggagacatcaacctggagctgtactgtgacaaggtt
cctaaagcaggagagaacttcaccaagctgtgtaagaagggttactacgacggaactgtt
ttccacagatctatcaggaacttcatgatccaaggaggagacccaactgggactggttta
ggaggagagtcattctggggtaagcccttcaaagatgagtttcgtcccaacctgtcccac
accggacgaggggttctcagcatggccaactcaggacccaacaccaacaagtcccagttc
ttcatcaccttccggtcatgtccctacctggacaggaaacataccgtgtttggaagggtg
gtgggaggctttgaggctctgacagccatggagaacatagaggctgatcctaaaaccgat
aaacccaagtctgagatcaagctgctgagtgccactgtgttcgtggacccgtatgaagag
gcagatgcccagattgcagcggagcgtcagaaggagtttgagaagcaggaggaggatcga
gctcagaccagtttgtctcagaggaagactaaagcagatcaggctcccaagaccttcaag
gctggcatagggaaatatatcaatcctgtgaccgctaccaccacgaaacgtccggcagta
gaggacagcggaccgtccaccagcggagccaagaaggtcaaaggaaagactggctttgga
gacttcagctcctggtaa
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