Oncorhynchus tshawytscha (Chinook salmon): 112239989
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Entry
112239989 CDS
T05605
Symbol
gtf2f2b
Name
(RefSeq) general transcription factor IIF subunit 2b isoform X1
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112239989 (gtf2f2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112239989 (gtf2f2b)
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
112239989 (gtf2f2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
RPC5
fvmX6
Motif
Other DBs
NCBI-GeneID:
112239989
NCBI-ProteinID:
XP_024264144
UniProt:
A0AAZ3SS19
LinkDB
All DBs
Position
LG03:58647766..58679166
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AA seq
281 aa
AA seq
DB search
MRCISCNLSVTPLLATSRVLKNLVKGSAAMSEKTEVDLTGAKQNTGVWLVKVPKYLAQQW
AKASGKGEIGKLKIVKKQGKADVSFTLNEDLTSLSALGEKAVSVRAPRDHPFTMHSVGGQ
TLAVFTETSADKISLEGMVVQRADCRPAVNENYMKLKKLQIEVSTKPQRLTEQMDRAVTN
NFKPVSNHVNNVEYEKKKRAEGRMVRADRQQVMDMLFSAFEKHQYYNIKDLVEVTKQPVT
YLKEILREIGVYNTKGTHKSTWELKPEYRHYQGGEEEIKGD
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgtatttcctgtaacctgtctgtgactccactgttagcaacttcacgtgtcctg
aagaacctcgtcaaaggttctgccgctatgtctgaaaaaacggaggttgatttaaccgga
gctaagcaaaacaccggtgtatggctagtaaaggttcccaagtacttggcccagcagtgg
gccaaagcatccggaaaaggagaaattggaaagctcaagattgtaaagaaacaaggaaaa
gcagatgtgtcgttcaccctgaatgaggacctaaccagcctgtctgccctgggagagaag
gcagtgtctgtacgagctccccgggaccacccattcaccatgcatagtgtgggggggcag
accctggctgtgttcactgaaacctctgcagataagatcagtctggagggcatggtggta
cagagagcggattgcagaccagccgtcaatgaaaactatatgaaactgaagaaattacag
attgaggtgtctaccaagccccagcgtctgaccgagcagatggacagggctgtcactaac
aacttcaagcctgtatctaaccatgttaataacgtggagtatgagaagaagaagagggct
gaaggtaggatggtgagggcagacagacagcaggtgatggatatgctcttctccgccttt
gagaaacaccagtactacaacatcaaagacctggtggaggtcaccaagcaacctgtgacc
tacttgaaggagatcctgagggagataggagtgtacaacactaaagggacgcacaagagt
acatgggaactgaagccagagtaccgccactaccagggaggagaggaggagataaagggc
gactag
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integrated database retrieval system
