Oncorhynchus tshawytscha (Chinook salmon): 112240042
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Entry
112240042 CDS
T05605
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2-like
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112240042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112240042
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112240042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab_bind
GRIP
Motif
Other DBs
NCBI-GeneID:
112240042
NCBI-ProteinID:
XP_024264187
LinkDB
All DBs
Position
LG03:complement(58772436..58807986)
Genome browser
AA seq
1589 aa
AA seq
DB search
MEQDTSPESVTSPPPGAAAKSKLDTLSKDDLIKFAKKQMAAIQKMKSKCAVLEKEVDTLK
SQPKGNSGDSIIQELTERMSALLLEKAETQQSAVLLRKENEKVKHREQDAVGKLATLLGE
LDQAKEDHQKKIAALEKSLDSSQAKHKEEVEFFQRLLRKKEENDREKESEREKEKQRERE
HTNQSVEAVSCSLESQILSLQTELAAALERSAQVASALQVDHQRALTEAQQEVENLREEL
AQHSVQHEEELRALEEDFEMEKERLLLLQEELSEQLALKDSFQQDVQEDEEPSGRSSGIA
RMLELSGSSLIDASDGETESGQLRSALEDQQSQNTMLQDELTFLGNVKTELEAELERVRE
EFHTEKEELQFKIEELLMTREVATPNRDLLSLETPNRDLQEAQAFTQLQQSGPQRDSMDG
LPASPASPSSPRQSLSCPVPGAAHQSLTLQEQQGQAQELRSQCESLDRSQAVAEYEHTRD
ILRGLETELGQRTGDVTRQYEAMKEHAASAVQELQESVRRLTEERDGLVERVKGLNEDRD
SLLEKVQGLEKRLESFLKQTQAAEGLKEQLQTSMEEKTALALKLKNSVEAQTVLASELKA
SLEVQTVLSVELRASVEDLSKQNGEILSQLQMKESAVQELEETVNVVSTERDRTLSALQD
REMEVMRLWEEREREVEESQGQREEVAELQARIEELEKERSLLKSNLEVVQRESSKNVQG
SPGEEVEELQARIEELEKERSLLKSNLGEVVGDTEALQKDLREMKLANEKMRTENQELLT
QVSQATETLADREREEKEGREEEEEQAEKERRELQQQLTEKDTVISQLRSEMAGLLSSAP
SPVSEENTANEFTEKIALLEKESKEKDERMNKIKAVAVKARKELDTSRKEAVLLKEEVEV
LKAERERVTSSMKDIIHGAEGYKNLQLDYDRQTEQLDKERETVEGAEKQISELTKRLNNA
VQQHEQLWSEREDLMTELETLRNTVRQMEGQTAELHRQTDTLNRDLQAERLLKEQKTKEL
SSLQKEVEELTVQLRRQKQQSQQTTQELEQLRKEAQQSSLLDMEMADYERLVKELNTKLS
EKDVCVEELKTQIHTHTQKEDTLNQEIEVLKSQLDQGEDKSSKMKQLLVKTKKDLADAKR
QEAIQMMTLASLKGELEAHQQQLENNKIQCCDLTAERHRLQEQLRTLTEQQQRTSSSLQQ
RLTTLQQEANTAKAELSSVTAEFDSYKVRVHNVLKQQKNKTSAQSDGDATKQEREQMESL
VDQYKAKLQDSQQSLAVSTAELQQLQMEHDTLLERHNKILQETVAKEAELRERFMSLQAE
IMSLRTEHAQTVGQLTSQAVAQRSGFREQIRHLQDEHRTTVETLQNQMTRLENQLFTLQK
QTSPAPVQTSRKSAVDRRPVDQGGTGGLGLGDLQSMAREEGEGMETSETESLSSTYLPSL
EQLLTSPDPKQEPFVWQVEPTKEELNQKLTTATRSMEHMNSLLHETEATNAVLMEQVNLL
KSEVRRLERNHEREKSVANLEYLKNVLLQFIFLQSGSERQALLPVIHTMLQLSPEEKNKL
AAIAMGEEEVGGARGSGWTSYLHSWSGIR
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggacaccagcccagagtctgtgacctcacctcctccaggtgctgccgctaag
tcaaagttggacacgttgtccaaagatgacctcatcaagtttgccaagaagcagatggct
gccatacagaagatgaagtccaaatgtgcagttttggaaaaggaggttgatactctcaag
tctcagccaaaaggcaattcaggtgactccatcatacaggaactgactgagaggatgagt
gccttgttgctggaaaaggctgagacccagcagagtgcggtgttgctgcggaaggagaat
gagaaggtcaagcaccgggaacaggatgcagtagggaaactggccaccctgctgggagag
ttggaccaggccaaggaagaccaccagaagaaaattgcagccttggagaagagcttagac
tcatcccaagccaaacacaaagaagaagttgaattcttccagaggcttctgaggaagaaa
gaagagaatgatagagagaaagagagtgaaagagagaaagaaaaacagagagaaagggaa
cacacaaaccagagtgtagaagccgttagctgcagcctggagtcacagatcctgagtctg
cagacagagctagctgcagccttggagcgaagcgcccaggtggcttcagcgctgcaagta
gaccaccagagggcgctgacagaggcccagcaggaagtagagaacctgagagaggagttg
gctcagcatagtgtgcaacatgaagaggagctgagagctctggaagaggactttgagatg
gagaaagagagactgctactcctccaagaggagctcagtgagcagctggctctcaaagac
agcttccagcaggatgtgcaggaagatgaggagcctagcggccgcagctcaggaatagcc
aggatgttggagctgtctggttcaagtctgattgatgccagtgatggagagacagagagc
ggacagctacgatctgccctggaggaccagcaatcccagaataccatgctgcaagacgag
ctgaccttcctggggaatgtgaagactgaactggaggctgagcttgagagggtgagggag
gagtttcatacagagaaggaggaactacagtttaaaatcgaagagttgctgatgacccgg
gaggttgcgacccctaaccgtgatcttctgagcctggaaacccctaaccgtgaccttcag
gaggctcaagctttcactcagctccagcagagcggcccacagagagattcaatggacggc
ctacctgccagtcctgctagcccctccagccccagacagagcctgtcctgccctgtccct
ggtgcagcccaccagagcctgaccctgcaagaacagcagggtcaggctcaggagctgagg
tcccagtgtgagtccctagacaggagccaggcggtggctgagtacgaacacaccagagac
atcctgagaggcctggagactgagctaggtcagaggaccggggacgtcaccagacagtat
gaagctatgaaggaacatgcggcttctgcagtccaggagctacaggagagcgtcagaagg
cttactgaggagcgagatggtctggtggagagggtgaaagggttaaatgaagacagagac
agcctgttggaaaaggtccagggcctggagaagaggctggagagcttcctaaagcagaca
caggcagccgaggggctgaaggagcagctgcagacgtctatggaggagaagactgcgtta
gccctcaagctaaagaactcggtagaggcgcagacagtgttagcctctgagctaaaggca
tctcttgaggtgcagacagtgttatctgtagagctaagggcttcagtggaggatctgagc
aagcagaacggggagatcctctctcagctacagatgaaggagagtgctgttcaggagtta
gaggaaacagtcaatgtggtgagcacagagagagacagaacactgtcagcactgcaggac
agagagatggaggtgatgaggctgtgggaggaaagagagagggaggtggaggagagtcaa
ggccagagagaggaggtggctgagctacaggctcgtatagaggagctggagaaggagagg
agcctgctgaagagtaatctagaggtggtgcagagggagagttctaagaatgtgcagggg
agcccaggggaggaggtggaggagctgcaggctcgtatagaggagctggagaaggagagg
agcctgctgaagagtaatctgggggaggtggtgggagatactgaagctctacagaaagac
ctaagggaaatgaaactggccaatgagaagatgagaacagagaaccaagaactactgaca
caggtcagccaggctacagagacactggcagacagagagagggaggaaaaggagggaaga
gaggaggaggaagaacaggcggagaaggagaggagagagctacaacagcagctaacagag
aaggacacagtgatatctcagctgagaagtgagatggctggcttactgtcttcagccccg
tctcctgtctcagaggagaacacagccaatgagttcactgagaaaatcgccctgctggag
aaggaaagcaaagagaaggatgagaggatgaataagatcaaggcggtggctgtgaaagcc
aggaaggagctggacaccagcaggaaagaggctgtgttgctgaaggaggaagtggaggtg
ttgaaggctgagagagagagagtgaccagctcaatgaaagacatcatccatggagcagag
ggatacaagaacttgcagctggactacgacaggcagacagagcagctggataaggagaga
gagacggtggagggagctgagaaacagatctccgagctgaccaaacgactaaacaacgca
gtacaacagcatgaacagctgtggtcggagagagaggacctgatgaccgaattggagact
ctgaggaatacggtgagacagatggaaggacagacagcagaactacacagacagacagac
accctgaacagagacctgcaggctgagcgtctactgaaggaacagaagacaaaggagcta
tcgtcgttgcagaaggaggtggaggagttgacagttcagctccgcagacagaagcagcag
tctcagcagacaacacaggagctggagcagctacgcaaggaggcccagcagagctcgttg
ttggacatggagatggcagactatgaacgcctggtcaaagaactcaacaccaaactgtca
gagaaggacgtgtgtgtggaggagctgaaaacacagatacacacacacacacagaaagaa
gacacactcaaccaggagatcgaggttctgaagtcccagctggaccagggggaggataag
agctccaagatgaaacagctgctggtgaaaaccaagaaagacctggctgatgccaagaga
caggaagccattcagatgatgacgctggcctctctgaagggagagctggaggcacatcaa
cagcaactagagaacaacaagatccagtgctgtgacctgactgcggagcgccacagactg
caggagcagctgaggactctgactgaacaacagcagagaacaagcagctccctacaacag
agactgaccacactacagcaggaggctaacactgccaaggctgagctgtcatctgtcact
gctgagtttgacagctataaggtcagagttcacaacgtcctcaaacaacagaagaacaaa
acctcagcacagagcgatggagacgccactaaacaggagagagagcagatggagtccttg
gtggaccagtataaagccaagctgcaggacagtcagcagagtctggcggtgagcactgca
gaactacaacagctccagatggaacatgacacactgctggaacgacacaacaagatactg
caggagactgttgctaaagaggccgagctcagagagagattcatgtctctccaggctgag
attatgtcactgcgaacagagcatgctcagacggtgggtcagctgacctcgcaggccgtg
gcccagcgctcagggttcagggagcagatccgccaccttcaggatgaacacagaactaca
gtagagaccctgcagaaccagatgacccggctggagaaccaactgtttacactgcagaaa
cagaccagtccagctccagtccagaccagtcgtaagtcagcggtggaccgccggcccgtg
gaccaggggggaacgggggggctgggcctcggtgatctccagtccatggctagagaggag
ggggagggcatggagacctccgagacagaatccctgtcatccacatacctaccctcactg
gagcaactactcacctccccagaccccaaacaggagccgtttgtgtggcaggtggagccg
actaaagaggagttgaatcagaagttgaccacagctacacgcagtatggaacacatgaac
agtctactgcatgagaccgaagctactaacgctgttctgatggaacaggtcaatctgttg
aagtctgaagtgcgtcgtctggagcgtaaccatgagagagagaagagtgtagccaatctg
gagtatctgaagaatgtcctcctgcagttcatcttcctgcagtcaggcagcgagagacag
gctctactccctgtcatacacaccatgttacaactcagccctgaggagaagaataaactg
gctgctatcgcaatgggtgaggaggaggtgggaggagctagaggctcaggatggacctcc
tacctacacagttggtcaggcatcagatga
DBGET
integrated database retrieval system
