Oncorhynchus tshawytscha (Chinook salmon): 112240062
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Entry
112240062 CDS
T05605
Symbol
pcbp4
Name
(RefSeq) poly(rC)-binding protein 4 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112240062 (pcbp4)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
112240062 (pcbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
MOEP19
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
112240062
NCBI-ProteinID:
XP_042180799
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All DBs
Position
LG07:complement(68365560..68503211)
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AA seq
469 aa
AA seq
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MNCEQDFGEGGMNVTLTLRLLMHGKEVGSIIGKKGETVKKIREESSARINISEGSCPERI
ITITGPTDCVFRAFTMITLKLEEDLTTLVANGTVTSKPPVTLRLVIPASQCGSLIGKGGS
KIKEIRETTGAQVQVAGDLLPNSTERGVTISGTQDAIIQCVKLICTVILESPPKGATVPY
RPSPSPGTVMISGNQVFEASEYGSHPLFQLAQGGLDLQQTYAVQNQYGIPHSELAKLHQL
SMQQQGLAAQMNQQQTNSVIPGMDSNSQTTSQELLIPNDLIGSIIGRQGTKINEIRQVSG
AQIKIGSQLDSTSDRAVTITGTPISINLAQYLITSCLETAKSTAQSSSMSTPADLTMAYS
QPPSPAQSSAVAAATLAAMGCPGMSHPHPHAAVPMMGTHPYGALPLSSLLGMQSMKSIQS
VPFLALSNPAANAAAAAGAHAQAQISYTAKISSANGIGKKPERQKFAPY
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtgaacaggactttggagaggggggcatgaacgtcaccctcacgctacggctc
ctcatgcacggaaaggaagttggcagcatcatcggaaagaaaggagagacggtgaagaaa
atacgagaagagagcagcgcccgtatcaacatctcagagggctcgtgtccagagaggatc
atcactattacaggacctactgactgtgtcttcagagccttcactatgatcactctcaaa
ctggaagaggacctcacaactctggtagccaatggcacggtcaccagcaagccccccgtc
accctacgattggtcattcctgccagccaatgcggttctctcatcgggaagggcggctcc
aagatcaaggagatcagagagaccacgggggcacaagtacaggtagcaggagacctcctt
cccaactccactgagagaggagtgacgatatccgggacccaagacgccatcatccagtgt
gtcaagctcatctgcactgtcattctcgagtcacctccgaagggggccactgttccatat
cgacccagcccctccccaggaacagtcatgatctccgggaaccaggtgttcgaggcgtct
gagtacgggtcacaccccctcttccaattggcccagggagggctggatctacaacaaacg
tacgctgtacagaaccaatatggcattccacattcagagttggccaagcttcaccagttg
tctatgcagcagcaaggcctggccgcccagatgaaccaacagcagaccaactctgtcata
cctggaatggactccaattcacagaccacatcacaggagctactcattccaaatgatctc
atcggctccatcatcgggcgtcagggcaccaagatcaatgagatccgccaggtgtcaggg
gctcagataaagatcggtagccagctggacagcaccagtgatagagccgtcaccatcaca
gggacacccatctctatcaacctggcccaatacctcatcacctcctgtttagagaccgcc
aaatccaccgcccagtcttcctccatgtcgacccctgctgacctcaccatggcctacagc
caaccgccctccccagcccagtcttcagctgtggctgctgccaccctggctgccatgggc
tgccctggcatgtcccacccccacccccacgctgcagtccccatgatgggcacccacccc
tatggggccctccccctctccagcctccttggaatgcaatccatgaaatccatccaatct
gtacccttcctggctttatccaaccctgccgccaatgcagccgccgccgctggggcccat
gcccaggcccagatctcctacacagcgaagatctcctcggccaacgggatcgggaagaaa
ccggagagacagaagtttgcgccatactga
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