Oncorhynchus tshawytscha (Chinook salmon): 112240115
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Entry
112240115 CDS
T05605
Name
(RefSeq) zinc finger protein DPF3 isoform X1
KO
K22198
zinc finger protein neuro-d4/cer-d4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112240115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112240115
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112240115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHD_4
PHDvar_NSD
zf_RING_Vps8
PHD_2
C1_1
Motif
Other DBs
NCBI-GeneID:
112240115
NCBI-ProteinID:
XP_042156956
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All DBs
Position
LG18:complement(38760173..38869482)
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AA seq
398 aa
AA seq
DB search
MATVIQNPLKSLGDQFYREAIEHCRSYNARLCAERSVRMPFLDNQTGVAQNNCYIWMEQR
HRGPGLGAGQMYAYPARCWKKKRRLHSPMDPQLHLCEIRLEAELAPKREPSPGEATALET
LLRGEGQLEKKKDIIKEDETLLEIQRVLEADENGDDFHHDNEDFEVDTPKRKQRKGRGRG
SSRRRAEAVSNDDVDKPYVCDNRYKQKHNSKTADSVCGKRYKNRPGLSYHYAHTHLAEEE
GEEREEREEEMPPTPPPPRPDPDPDNHKPQRAADGSIIPNDYCDFCLGDSDSNRKTGQAE
ELVSCSDCGRSGHPTCLQFTDNMMMAVKTYLWQCIECKSCSLCGTSENDDQLLFCDDCDR
GYHMYCLKPPMTQPPEGSWSCHLCLDLLKDKASAYEEP
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtcattcagaatcctctcaaatcgctaggtgaccagttctaccgggaggcc
atagaacactgtcgcagctacaacgcccgtctgtgtgccgagcgaagcgtccgtatgccc
ttcctggacaaccaaactggcgtggcccagaacaactgctacatctggatggaacagcgc
caccgtgggccaggtctgggtgctggacagatgtatgcgtacccagctcggtgttggaag
aagaagaggcggcttcactcccctatggaccctcagctacacctctgtgaaatacgactg
gaggcagagctggcccctaagagggagccctccccaggagaggccacagctctggagact
ctgctcagaggggagggacaactggagaagaagaaagacatcatcaaggaggacgagacc
cttctggagatacagagggtcttggaggccgacgagaatggggacgattttcatcatgac
aatgaggactttgaagtggacactccgaagaggaagcagaggaaaggaaggggccgagga
tccagccgcagaagggcggaggctgtgtccaacgacgacgtggataaaccttacgtctgt
gacaacagatacaaacaaaagcataactcaaaaactgctgactcagtctgtgggaagcgc
tataagaaccgtccaggtctgagctaccactacgcacacacacacctggcggaggaagag
ggggaggagagggaggagagggaggaagagatgccaccgaccccgccaccaccccgacca
gacccagaccccgacaaccacaaacctcagagggcggcagatggctccatcatccctaac
gactactgtgacttctgtctgggagactctgactctaacaggaagactggccaggctgag
gagctggtgtcctgctctgactgcggccgttctggccaccctacctgtctgcagttcaca
gacaacatgatgatggcggtgaagacctacctgtggcagtgcatcgagtgcaagtcctgc
agcctctgtggcacctcagagaacgacgaccagctgttgttctgcgacgactgtgacaga
ggataccacatgtactgtctgaagccccccatgacccaacctcctgaggggagctggagc
tgtcacctgtgtttggatctgttgaaggacaaggcctcagcctatgaagagccatag
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