Oncorhynchus tshawytscha (Chinook salmon): 112240122
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Entry
112240122 CDS
T05605
Name
(RefSeq) syntaxin-19 isoform X1
KO
K08487
syntaxin 11
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112240122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112240122
Membrane trafficking [BR:
otw04131
]
SNARE
Syntaxin (Qa)
Stx-PM
112240122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
CENP-H
DUF5799
DUF6099
TolA_bind_tri
DUF5344
Motif
Other DBs
NCBI-GeneID:
112240122
NCBI-ProteinID:
XP_024264241
LinkDB
All DBs
Position
LG03:59453593..59459898
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AA seq
304 aa
AA seq
DB search
MKDRLEELRQRAQGFREVSRETDDTPFPEEDANPDAPLGVKVATPQQAVVFEQEPVLHNF
LSEAQHIRGDITELETEVKKFSQQQRTLVATMRRFSVMKKDSDVTTDIKLQAESIHRRLD
DLSKKAQSLEDMQGLATATTRIQRSQHAVLHRQFQQVMCLYNNSILSKQEHCKNFLIRQL
EVFGRDVTEEGVDEMVATGKWEVFNQNLLNDERITRAQLSEIEQRHKELLNLESNMKELR
ELFMDIFMLVEEQGGYIDNIQTSVEKTQDYVTVTNEKFKMATRYKKKNPLRRLCCCCCPW
RCCT
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgcctggaggagctgcgtcagagggcccagggttttcgggaggtgagcaga
gagacagatgataccccattccctgaggaagatgctaacccagatgccccattgggggtt
aaggtcgccaccccgcagcaggctgtggtgttcgagcaagaaccagtcctgcacaacttc
ctgtccgaggctcagcatatccgcggtgacatcactgagctggaaacagaggtgaagaag
ttcagccagcaacaaaggaccctggtggcaaccatgcgtcgtttcagtgtgatgaagaag
gacagtgatgtgacgacggacatcaagctgcaggcagagagcatccacagacggctggac
gacctctccaagaaggcacagagtttagaagacatgcagggactggctacagccactaca
cgcatccaacgctcccaacacgcagtgctacacagacaattccaacaggtgatgtgtctg
tacaacaactccatcctcagtaaacaggagcattgtaaaaacttcctcatccgccagctg
gaggtgtttggtcgtgacgtcaccgaggagggagtcgatgaaatggttgccacggggaag
tgggaggtgtttaatcagaacctgctcaacgacgaacgcatcacacgtgctcagctgtcc
gagatcgagcagagacacaaggagctgctgaatctggagagcaacatgaaggagctgaga
gaactgttcatggatatctttatgttggtggaggagcaaggaggctacatagacaacatc
cagaccagtgtagagaagacacaggactacgtcaccgtcactaacgagaaatttaaaatg
gccaccaggtacaagaagaagaaccctctaaggagactgtgctgctgttgctgcccctgg
aggtgctgcacatag
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