Oncorhynchus tshawytscha (Chinook salmon): 112240184
Help
Entry
112240184 CDS
T05605
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112240184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112240184
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
112240184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
112240184
NCBI-ProteinID:
XP_042184048
LinkDB
All DBs
Position
LG10:11211678..11282191
Genome browser
AA seq
1800 aa
AA seq
DB search
MDDEDGRCLLDVICDPEALNDFLHGLDTHLDTDDLLDGSSDPSSSFFSGTGCHIPEVLPP
VQLLSNEQPVLPRVSVDLDFLEDDVILGESPGGSGSNTMEPCDILQQSLAEANITEQSLQ
EAEAELDLGSFDLTMPGLTQVVQTLPCTDSLTGSGGPPVGVGLPIFPEAPGSSTTPPQAT
ADMLGSVLAQQGLEFGPQVMNKAQTISMQPFIQQVAGLGNVTLQPIASLQALPNGCQSGH
LGLGQIQVMGQPTVMTMNQSGQPILAKSMGGYQLHQPGPEAQGAGGQGGLGGGLLIHGGK
ATLGSPVLNGPALGTNSNDSTITAAGSLGQQGQNLIIQRTPTPIQPKPPQGGAAIQPKLF
KQQQAQPHTLQNDANKALAAQVPVSAAQNVAFLTGKPGANVVLTSQAGLRQQALFKQQTA
HHPSGKALSVHLLNQPGSIMLGGQNHQFLLPQQLAGGQILTQHPGGHIITSRGPGGQLIA
NQILAQHQNINLGQVLTSQGHPLLQGHIQLQPGQMGVGHQLFQIPVTLSQSQSHPVTGHQ
AHTVIQGMPLHNSLAMLSQVEGLSPAVSLQPALQPQPGGVPSSGVGGAAAIAQGQPGGSV
PIRGSSTDQAAHPGQAPQPSSILSMQAGPSVSMAMSVPSSSPSLSVSTTLVPHLAQQHSP
GSRVLFTGHQGSSMILSQEHLQMFLQQDQRQTENDPVPTVSVGVPASVIVSSNSSFGQAS
SGHDSQLAETAVVNQMPQAGGQQQQLKLQSLSPSQPLASHTALPLSDSPLPSPLHMHSPQ
SWPPSQPQTPARSCTPSSLPQCSLSRTRYQATPSLPHNNNNRYTSSPGPPSLLSTNRMSP
SLSLPQTPQILQAPLAGLQFTASQVGDPGGGVLKTQVLTAERQHRLQLVGAQPSPQQKHQ
VQQNILLQAKRQQQSQPQPQPHGGQQQDVPAPQSSVLVKTPATAFNDVLSGALVTQGGVA
PANQPGQQSLHQAVQVGGMESVSGLSQMTSTQQTFSPGLASLQTQTAAMKLPFSMAKPSK
EARMLEQLRKQQGSVLHPDYRSSFQCFEDTLTGLVPYHLYQGTATPPHDYDRGTHTLTRL
VPYHLYQGTATAPHDYHRVDDEFERVSSQLLKRTQAMLDKYRHLLFEESTRLGPSAEMVM
MDRMFIQEEKISLGQDRILARDRPDEYVANSRMMEIESGAANMAQSKLQLQSQLHHKPLS
HPQPLSQSHPQPLSQPHPQLHSEPQLQSEPHPQPLSQPHPEPLSQPHPEPQPHPEPLSQP
HPEPQPHPEPQPHPQPLSQPHPEPQPRSQPQPHPQPLSQPHPEPQPHPQPLSQPHPEPQP
RSQPQPQWFEPSPVRSVVAPAPAPTPIQDHFPSTKLVIKQGGAGASVSWSSSPAPVARPG
SGVRQTADTQSHSSSFSRAPPPPSRHSPHHPFSSSRPAEDDDTLPRRTSKPPMKTYAARP
RIGLKLKIKQEAGFSKVVQNTALDPVHTPSTPNPKPQPLPTTLPHPAPPLPTTLPQPAPA
LTTTLPQPAPALPTTLPQPAPALPTTLPHPVPALPTPRPQPAPALPTPRPQPAPALPTPR
PQPTPALPTPRPQPTPALPTTRPQPTPALPKAQAAARATPPTITVIRTPPPSCNTASSAM
VSIATTQATPSPQRVTAPTSSSTAQMNGALEHHNVGGVKRNTASTATSPQTTCRLPLRKT
YRENISPRVRPGVPGGGGDSVPYPRPSPSPPNSPPTLLTLSLLRGDSDHQHEAGEERRQP
QGGGLPHRAQPGGPEAGELLPLLSWPSAGHHKHPAASLRQRGGEGERRGSLGQRGGHGEV
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaagatggcaggtgcctgctagatgtcatttgtgacccagaagcactaaac
gattttcttcatggattagacacccatctggacactgacgacctattggatggctcgagc
gatccctccagctctttcttctcgggcactgggtgccacattccagaggtcctgccccca
gtccagctgctgtccaatgagcagccagtcttgccccgggtcagtgtggacctggacttc
ctggaagatgatgtcatcctgggcgagtcgccgggcggtagcggtagcaacaccatggag
ccatgtgacatcctgcagcagagcctggcggaggctaacattacagagcagagcctgcag
gaggccgaggcagagctggacctgggctccttcgacctcaccatgccaggtctgactcag
gtggtccagaccctgccctgtacagatagcctgactgggtctggagggccccctgtgggg
gtggggctccccatcttccctgaagctccaggctcctccaccacccctccccaggccaca
gctgacatgctgggctcggtgctggcccaacagggcctggagtttgggccccaggtcatg
aacaaggcccagaccatcagtatgcagcctttcattcagcaggtagcaggcctgggtaac
gtcacccttcagccaatcgcctccctccaggctctacctaacggctgtcagtcaggacac
ctgggactgggacagatacaggtgatgggccagcccactgtgatgactatgaaccaatca
ggacagcccatcctggccaagagtatgggaggataccagctgcaccagcctggccccgag
gcacagggggcaggtgggcagggcggactgggagggggacttctgatccatgggggcaaa
gctactctgggatctccagttttaaacggcccggcgttgggcactaacagtaacgatagc
accataactgctgctggaagcttgggtcaacaggggcagaacctgatcatccagcgaacc
ccgacccccatccagcccaaacccccccaggggggcgcagccatccagcccaaactgttc
aagcagcagcaggctcagccccacaccctccagaatgatgccaacaaggctcttgcggct
caggtccctgtctccgctgcccagaatgtagccttcctgacaggcaagcctggcgccaat
gtggtcctgacctcccaggcagggctacgccaacaggctctgttcaaacagcagacagcc
caccacccctctgggaaagcactcagtgtccacctgctcaaccagcctggcagcatcatg
ctgggggggcagaaccaccagttcctcctgccacagcagctagctgggggtcagatcctc
acacagcaccctggggggcacatcatcacctcccgggggcctgggggccagctgatagcc
aaccagatcctggctcagcaccagaacatcaacctgggccaagtgctgacttctcagggc
caccctctgctccagggccacatccagctgcagccgggccagatgggggtgggacatcag
ctcttccagattcctgtcaccctctcccagagccagagccacccagtcacgggccaccag
gcccacacagtgatccagggcatgcccttgcacaactccctggccatgctgagccaggta
gaagggttgagtcctgctgtcagcctgcagcccgctctgcagccacagccagggggcgtt
cccagcagcggggtgggtggggctgctgccattgcacagggccagcctggggggagtgtg
ccgattcgggggagttctacagaccaggcagcccaccctggacaagcccctcagccctcc
tccattctctctatgcaggctgggccctctgtctccatggccatgtctgtcccctcctcc
tctccgtccttatctgtgtccaccacactggtcccccacctagcccagcagcacagcccc
gggagcagggtgctcttcacgggccaccagggctccagcatgatcctcagccaggaacac
ctccagatgttcctccagcaggaccagcgacaaacagagaatgatcccgtccccactgtg
tcagtgggcgtgccagcgtccgttatcgtcagcagcaacagcagctttggccaagcctcc
tcgggccatgacagccaattagctgagacagcagtggtaaaccagatgccccaggcgggt
ggccagcagcagcaactgaagctccagagcctgtccccctcccagcccctcgcctcccac
actgcccttcctctgtcggacagccccctgccctcccccctccacatgcattccccccag
tcctggcccccttctcaaccccagacccccgcccgatcctgcaccccctcctctcttccc
caatgttcattatccagaaccagataccaggccactcccagcctgccccacaacaacaac
aacagatacacctccagccccggccctcccagcctgctctctacgaaccggatgtccccc
tccctctcgctcccccaaaccccccagatcctccaggcccctctggcagggctccagttc
actgctagccaggtgggggaccccgggggtggggtgttgaagacccaggtcttaacagca
gagcggcagcaccgcctgcagctggttggtgctcagccctctccacaacagaaacaccag
gtgcaacagaacattctactacaggccaaaaggcagcagcaaagccagccccaaccccaa
ccgcatggtggtcaacaacaagacgtgcctgctcctcagtcatctgtgctggtcaagact
cctgccacagcattcaatgatgtgttgtcaggagctcttgtgacccaggggggcgtggct
ccagctaaccagcctggtcaacagtcactacaccaggctgtgcaggtgggggggatggag
tccgtgtcaggtctgagtcagatgacctctacacagcagactttcagccctggtctggcc
tctctacaaacacagactgctgctatgaagttgcctttcagtatggctaaacccagcaag
gaagccaggatgttggaacagctgaggaagcagcagggctcagtcctccacccagactac
agatcttccttccagtgctttgaagacaccctgaccggcctggtgccttaccacctctac
cagggcactgccaccccaccacacgactacgacagaggtacacacaccctgacccgcctg
gtgccttaccacctctaccagggcaccgccaccgcaccacacgactaccacagagtggat
gatgagtttgagagggtttccagccagctcctgaagagaacgcaggctatgctggataaa
tacagacacctcctttttgaggaatcaacgcgccttggcccatcagctgagatggtaatg
atggacaggatgtttattcaggaagagaagatctctctgggacaggaccgcatcctcgcc
agagacaggcctgatgagtatgtggccaactcaaggatgatggagattgagagtggagct
gccaacatggcccagtccaagcttcagctacagtcccagctccaccataagcccctgtcc
catcctcagcccctgtcccagtcccatcctcagcccctgtcccagccccatcctcagctc
cattccgagccccagctccagtccgagcctcatcctcagcccctgtcccagccccatcct
gaacccctgtcccagccccatcctgaaccccagcctcatcctgaacccctgtcccagccc
catcctgaaccccagccccatcctgaaccccagccccatcctcagcccctgtcccagccc
catcctgaacctcagccccgttcccagcctcagccccatcctcagcccctgtcccagccc
catcctgaaccccagccccatcctcagcccctgtcccagccccatcctgaacctcagccc
cgttcccagcctcagccccagtggtttgagcccagccccgtaaggagtgttgttgcccct
gctccagccccaacaccgatccaggaccacttcccctccaccaagctggtgataaagcag
ggaggagcgggggcgtctgtctcctggtccagctccccagctcctgtggccaggccgggg
tcaggggttagacagacagccgacacccagagtcacagctcctccttcagccgcgctcct
ccacctccctcccgtcactcaccccaccaccctttctcctcctctcgtccagctgaggat
gatgatactctcccccggaggaccagtaaaccccccatgaagacgtacgccgcccgccca
cgcatcggcttgaagctcaagatcaagcaggaggcggggtttagtaaggtggtgcagaac
accgccctcgacccggtccacacgccatccacacccaaccctaagccacagccactccct
accaccctgccccacccggcgccgccactccctaccaccctgccccaaccggcaccggca
ctcactaccaccctgccccaaccggcaccggcactccctaccaccctgccccaaccggca
ccggcactccctaccaccctgccccacccggtgccggcactccctaccccacgaccccaa
ccggcgccggcactccctaccccacgaccccaaccggcgccggcactccctaccccacga
ccccaaccgacgccggcactccctaccccacgaccccaaccgacgccggcactccctacc
acacgaccccaaccgacgccggcactccctaaagcccaagcagcagcacgagccacgccg
cctactataactgtcattaggactcctccccctagctgtaacacagcctcctcagcaatg
gtctccatagcaaccacacaggcgacccccagcccacagagagtcacagcgcccacatct
tcctccacggctcagatgaacggagcgttagaacatcacaatgtgggtggagtcaagcgt
aacactgcctccacggccacttcccctcagaccacctgccgcctgcctctacggaagact
taccgggagaacatcagcccccgcgtccgaccgggcgtaccgggaggaggaggagacagt
gtcccgtacccccgtccctccccctcgccccccaattctccccccaccctcctcaccctc
tccctcctcagaggggacagtgatcaccagcatgaagctggagaagagaggaggcagccc
cagggaggggggctcccacacagagctcagccgggaggccctgaggctggggaactcctc
cccctcctctcctggcctagtgcagggcatcacaaacacccagcagcatctctcagacag
agaggaggagagggggagagaaggggatcattgggacagaggggcggacatggggaggta
taa
DBGET
integrated database retrieval system
