Oncorhynchus tshawytscha (Chinook salmon): 112240216
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Entry
112240216 CDS
T05605
Symbol
chtf18
Name
(RefSeq) chromosome transmission fidelity protein 18 homolog isoform X1
KO
K11269
chromosome transmission fidelity protein 18
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112240216 (chtf18)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
112240216 (chtf18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_5
RuvB_N
AAA_16
AAA_14
nSTAND3
Rad17
FoP_duplication
AAA_22
AAA_18
AAA_28
AAA_33
Zeta_toxin
AAA_7
AAA_30
IstB_IS21
NB-ARC
AAA_17
AAA_3
T2SSE
NACHT
TsaE
Sigma54_activ_2
ABC_tran
TIP49
AAA_19
NTPase_1
AAA_24
Viral_helicase1
SGNH
RsgA_GTPase
AAA_25
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
112240216
NCBI-ProteinID:
XP_042172395
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MDEYDEMFGIEDEYEQQFADELEVLAEMDFNPAPSTKRSEFRKQKPQSFQEAIAAGDQPL
RSQSQASSERSLGQLEGPSVACDGEDIEHLLADEPITPKAKRLRQDVAKKLFEGSQVDDI
TPPSSPEEFHRTPSSRPQLIPVILDISGFAAIQESPRRVTAATSCHVLKRPPAEGGYVSV
TDQTGNRVYLRQTDDLRGKAVDPSAFRSSHNALGLLAVPIEVLREQVAEKRHRQVVEESQ
RLTERLNSQVDEEFGELDGRQREEGDREEEEEEPSRLWVDQFSPQHYTELLSDDFTNRCL
LKWLKLWDQVVFGRERKTRPPPAERPDQNTANQDQGRFNKGRGRFNSTNRSQGNFNQANQ
KFKTKSQITEELLEAELDQYKRPKYKVVLLSGPPGLGKTTLAHIIAKHAGYNVVEINASD
DRSAELFQKRIDTATQMRSVLGANEKPNCLIIDEIDGAPAAAISILLATLNRKDSQGADS
EAEPLKKKKKKESVLLRPIICICNDLYVPALRPLRQQAFLLAFPQTQPSRLAQRLAEISR
GQGMKADMGTLMALCEKTDNDIRSCINTLQFLHGRGKRQLDVQSVQSMRIGQKDQNKGLF
NLWQEIFQLPRIKRKRVGEELEEGLREGGGAERLQHILHLASSTGEHDKLTQGLYDNFLS
MRVKDPGLGRVCQALDWLGFSDGLTQAMLQGQNFSLLRYQPFLPAAFHFLFAHTHVPRIN
YPHSQYEALTKTSASRNALAAMLSEVPACIRTRVSELSLSLDILSLLLDIICPKLRPVNP
QLFSDREKQQLVDLIHTMISYNLSYRQDRTPDGQYVYVLEPRVEQVVCFPGLPPHRQLTY
QTKQTISREMDQERMRRAESLMLLRNPHTKQEDEKEKQPKAVTSSVTSSVRNHQQRLENI
LRNTVVEIRPEVDFFGRAVAPKEKPQVVSATGEVCVEVAMGTAVGNSDVWFRFNEGVSNA
VRRNIYIRELL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtatgacgagatgttcgggatagaggacgagtatgaacaacagttcgctgat
gagctggaggtcctggctgagatggactttaatccagctccttccactaagcggtcagag
ttccggaagcagaagcctcagtcgttccaggaagccatcgccgctggtgaccagccactc
aggagccaatcacaggcatcgtcagaacggagcctcggccaattggaaggcccgtctgtg
gcgtgtgacggagaggacatagaacacctgctggcggacgagccaatcactcccaaggct
aagcgtctgaggcaggatgtggctaagaagctgtttgaggggtctcaggttgatgacatc
acccccccgtcgtctccagaggagttccatcgaaccccgagcagcagaccccagctaatc
ccggtgatcttggacatcagtggcttcgcagccatccaggagtctcctcggagagtcacc
gcggcaacgtcgtgtcacgttctgaagcgccccccggccgaggggggatacgttagcgtg
acggaccagacaggaaaccgcgtctacctccgacagacagacgacctgaggggaaaggct
gtggaccccagtgcttttcgtagctcccataatgcattgggtttgctggctgttcccatc
gaggtactgagagaacaggtggccgagaagcgtcatcgccaagtggtggaggaatctcag
cgcctaacagagcgactcaacagtcaagtggatgaagagtttggagagctggacggcaga
cagagagaagagggggatcgagaggaggaggaggaggaaccttctcgtctctgggtggat
cagttttctcctcaacactacactgaactactcagcgacgacttcaccaaccgctgtctg
ctgaagtggctgaagctgtgggaccaggtggtgtttggacgagagaggaagacacgccca
cccccagccgagaggcccgaccagaacacagccaatcaggaccagggacgcttcaataag
ggccggggtcgctttaattccaccaaccggagccaggggaactttaatcaagccaatcag
aaatttaagaccaagagtcagatcactgaggagcttctggaggctgaactggaccaatac
aaaaggcccaaatacaaggtggtgctgctctctggtcctccgggtttagggaagaccact
ctagcccacatcatcgctaagcatgctgggtacaacgtggtggagattaacgccagtgat
gaccgcagtgcggagctgttccagaagcgtatcgacacagcgacccagatgaggtcagtg
ctgggagccaatgagaagcctaactgcctcatcatcgacgagatcgacggagcgcccgcc
gctgccatcagcatcctattggccactctgaacaggaaggacagccagggggcggattca
gaggcggagcctctaaagaagaagaagaaaaaagagtcggtcctcctccgaccaatcatc
tgcatctgtaacgacctgtatgttccagccctgaggcctctgaggcagcaggcgttccta
ttggccttcccccagacacagccttcccgcctggcacagagactggctgagatctccagg
ggccagggtatgaaggctgacatggggactctgatggctctctgtgagaagacggacaac
gacatcagatcctgcataaatacactgcagttcctccacggtcgagggaagagacagctg
gacgtgcagtcggtccagtccatgaggatcggtcagaaggatcagaataaaggactgttc
aacctctggcaggagatcttccaactgccgcgcatcaaacggaagcgtgtgggcgaggag
ctggaggagggccttagagaaggaggcggggccgagagactacagcacatccttcacctg
gcctcttccaccggagagcacgacaaactcacacagggtctctatgataacttcctgtct
atgcgtgtgaaggaccccggtcttggcagagtgtgtcaggctctggattggttgggcttc
tcagacgggttgacccaggccatgctgcaaggacaaaacttctctctgctgcgataccag
cccttcctccccgcagctttccacttcctgtttgctcacacacacgtcccccgcatcaac
tacccccacagccagtacgaggctctaactaagacctcagccagcaggaacgctctggcg
gccatgttgtctgaagtcccagcatgcatcaggactagagtcagtgagcttagtctcagt
ctggacatcctgtctctcctgctggatatcatctgtcccaaactacgacctgtgaacccc
caactgttcagcgacagagagaaacagcagctggttgatctgattcacaccatgatctcc
tacaacctgtcctacagacaggacagaacgcctgatggacaatatgtctacgttctggag
ccgcgtgtggagcaggtggtctgtttcccaggcttgcccccccacagacagctgacctac
cagaccaaacagacgatcagcagagagatggaccaggagaggatgaggagagcagagtca
ctgatgctgctacgcaacccacacacgaagcaggaggacgagaaggaaaagcagcctaag
gcagtgacatcatctgtgacatcgtccgtcaggaaccaccaacagaggctggagaacatc
ctgagaaacactgtagtcgagatcaggccggaggtggatttctttggccgagccgtcgcc
cccaaggagaaaccacaggtggtctccgctacaggtgaagtgtgtgtggaggttgccatg
gggacagcggttggcaacagtgacgtgtggttccgcttcaacgagggcgtgtccaacgcc
gtgcgacgcaacatctacatcagagaactgctataa
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integrated database retrieval system
