Oncorhynchus tshawytscha (Chinook salmon): 112240224
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Entry
112240224 CDS
T05605
Name
(RefSeq) guanine nucleotide exchange factor for Rab-3A isoform X1
KO
K16779
Rab-3A-interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112240224
03036 Chromosome and associated proteins [BR:
otw03036
]
112240224
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112240224
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
112240224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec2p
SpGH101_helical
AviRa
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
112240224
NCBI-ProteinID:
XP_042157894
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All DBs
Position
LG19:complement(56989798..57016718)
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AA seq
506 aa
AA seq
DB search
MDAFEGLHSVQLSSSPPASACNPGYEVLVSAGSGVQVYSNATFYGKPSVLEHTQRRGRDK
YPSYREERCEVGRLVDLEPGPSPRVDGGGPADPGFTRPQEGAVAQARRREGSRLEGATQG
GEHEDNVSRLRSSSLEIREKGSEILREQLDAAQKELKLKDKECERLSQVRDQLEQELEEL
TASLFEEAHKMVREANVKQAAAEKQLKEAQGKIDVLQAEVSALKTMVLTSTPSSPNRQAH
PQLLSPGTRSKGASPRHGGGHTRNKSASWALPLAPGGNLDLHSLQPVREDKEPTVPALLS
LILCLVPGHSISVTYEPYWAEKGEGPRSLSRQMDNVLYAEFLTWKDRPSLDRTSAFLGRI
YREDIGPCLSFTKSELSQSVQNAVENNSLTIEPVAVSALPMVKANAIECGGPNGLRAAVE
TKCALSGMSRSCKHRIKLGDRESYYHISPSSRARITAVCNFFTYIRYIQQGLVRHDAEQM
FWEVTRLRREMTVAKLGFYLTDTDQG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttttgagggtctccacagtgtccagctgtcctcctctccgcctgcctctgcc
tgcaaccctgggtatgaagtactagtctcagctgggtctggtgtccaggtgtactccaac
gctacgttctatggaaaacccagtgttctggagcatacacaacggagagggagagataaa
tatccctcctaccgagaggagaggtgtgaggttggaaggttggtagacctggagcccggt
ccgagcccccgggtggacggcggtgggccggctgacccaggtttcaccaggccccaggag
ggagctgttgcccaggcccggcgccgggagggcagcaggctggagggtgctacccagggc
ggggagcatgaggacaacgtgtcccgcctccggagctcttccctggagatcagagagaag
ggatcagagatcctacgggaacaactggatgctgcacagaaggagctgaagctgaaggat
aaggagtgtgagcgtctgtcgcaggtcagagatcagctggagcaagagctggaagagctc
actgccagtctatttgaggaagctcacaagatggtgcgggaagccaacgtgaaacaagcc
gcagcagagaagcagctgaaggaggctcagggcaagattgatgtccttcaggcggaggtg
tcagccctgaagaccatggtcctaacctccaccccgtcttcccccaatcgccaggcccac
cctcagctcctctccccgggcaccaggtccaagggggccagcccccgccatggaggagga
cacacgcgcaacaagagcgccagctgggccttgccattggcccctggtgggaacttagac
ctgcactccctgcagccagtcagagaggacaaagagcctacggttcctgcgctcctctct
ctgattttgtgtctggttccgggccactcgatctctgtgacctatgaaccctactgggca
gagaagggggaggggccacgctctctcagccgacagatggacaacgtgctgtatgcagag
ttcctgacctggaaagacagacctagtctggacagaacgtcagccttcctgggccgtatc
tacagagaggacatcggcccctgtctctccttcaccaaatctgagttgtctcagtcggtg
cagaatgcagtggagaacaactcgctgaccatcgaaccggtggccgtgtctgctttaccc
atggtcaaagccaacgccatagagtgtggcgggcccaatggcctgagagcagcagtagag
acgaagtgtgcgttgagcggcatgtcccggtcctgtaagcaccgcatcaaacttggagac
agagagagttactaccacatctctccctccagcagggcacggattacagcggtgtgtaat
ttcttcacctatatccgctacatacagcagggcctggtcagacatgatgcggaacagatg
ttctgggaagtgacacgtctacggcgggagatgactgtggccaagctgggcttctacctc
acagacacagaccagggatag
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