Oncorhynchus tshawytscha (Chinook salmon): 112240538
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Entry
112240538 CDS
T05605
Symbol
lrrk1
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 1
KO
K08843
leucine-rich repeat kinase 1 [EC:
2.7.11.1
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112240538 (lrrk1)
Enzymes [BR:
otw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112240538 (lrrk1)
Protein kinases [BR:
otw01001
]
Serine/threonine kinases: TKL group
LRRK family
112240538 (lrrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
LRR_8
LRR_4
COR
Roc
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ras
Arf
LRR_9
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
112240538
NCBI-ProteinID:
XP_042174965
LinkDB
All DBs
Position
Unknown
AA seq
2080 aa
AA seq
DB search
MSYWSVGLSKATGDTQSNNMEEQEKHDLEQDGSLAVEDMGAKASAMGSGGASSLGPSPTL
ENIQAAYGEGESSRARELIQQACCVECSAASPRLEGLRLLCVATQHGDEESVSYLLHEAH
VPLPLEPSEGNPAILAAHYGHVSLVRELLDSVPGPCVHRDLLNWMLVSACQQGHLEVVRM
LVQGYHADAEDCAIHQEEFAVITGLPLYAAARAGNEEIARFLLQNGAGLSSYTLMDYPAF
SRLLVEQRLVEEADTHTEPAGEKLLCGRWSGLKLPWLELDWFMDVSSRISHLDLSCNSLS
SLPSVVPWGLIQLRTLDLSNNLFKELHTAPSSQEIICSRLRQVNLSQNELTSLPSGLLHL
TRVQRLSAAKNKLTSLFDIPNGTNWIGLRKLEELDVSDNCLTSLPSAVLHSFKSLTSLKV
CRNRLTSFPDPWACPLKHCRASSNAIESLPNTISIFWRTQLQELDFSDNVIKELPSYIFE
LEALVSLRLCRNQISTLPAPNKWKCSLLRTLDLSRNHLGKTEEGPKTRKLAFLTTWHRRD
PDPVCPIEFPVILRDALEVLSLNDNQLECVPQSVCGLRNLMELYLSNNPGIRELPAELGQ
LSNLWQLDIEDLNITNVPQDIRKEGPASVLSFLRAHLRKAEPCKLLKLLVIGPPRQGKTA
LLEALQTGRTSPFSPAERNISTATWELDRPNGVKASADSVAFNVWDIGGPANMSTVNQCF
FTDKALYVVIWNLALGEEAVASLQSWLLNIEARAPNSAVVVVGTHLDLIDTKFRTERVAT
LRAYILALCRSPSGARASGYPDITWKHLHEVSCKTQEGLDGLKRLIFQVACYMKDNSSSS
ASGHKLLGRLIPKSYLTLQQAVLDERGRRDAEDEVQYLTDAQLDLVIEQNPGSDIRDYED
LQTAISFLIETGTILHFPDTSHGLCTLYFLCPVWLSDCLERIIHLKSSRSVAWNGVIRAE
DLRMLLVGTGFTQQTEEQYFQFLAKFEIALPVASDSYLLPHLLPPKPAMDIHGFRQETAN
SIQRLFKMSFVPAGFWERFIARMLISLNEMDLQSFEPKRNAKSERRRTTVIYSFAGTGSQ
QRHRCSTFRVRRSQTIYWREGLLVTFDGGYLSVESTDVNWKRKKSGGIKIICQSETRDFS
AMAFITDHVNSLIEQWFPALTASESDGTRLIEQYAPCPQCSSMSRQNQGPGDLGEPPTRG
TAVGRRGGEGREKGGGRGGHFFNMEDCVIAAMGQEYIVCPQHTNQPVPLQELVPELFMTD
FPSRLFLEKAQLECSEEESDILGQGGSGTIIYRACYRGQPVAIKRFHFKKCRQQTISSGT
DTMMKHFQSMDACRSFSEFRQETSMLHSLQHPCIVLLVGISIHPLCFALQLAPLGSLNIV
LEDRHKGSRYMPLGHMLTFKAAYQIAAGLAYLHRKNIIFCDLKSDNILVWSLEVCDPVNI
KLSDYGISRQSFHEGALGVEGTPGYQAPEIRPGIVYDEKVDMFSYGMVVYELLSGCRPAL
GQHQLQIAKKLSKGIRPTLGNPEEVQFHCLHGLMIECWDTKPEKRPLAMQCVRQMQEPSF
PCLKYLLACDTHSQLFLSHLQGHSAVFWDGDKDDRNYSVVNVETGHVEVKRMPCPGTRLS
CQMKMDNTLWTATEEQEVFIYSLKEMCPLSQPQKQISCPAIVTCLFPVPARDQTQACVFM
GMSDGLVAVYSLMDDMPVEGETYLCSHTLNMTMFGMEDSDPRQRPYPVRSMVLVHSGSQL
WYSHGPGLLVIDCRTLQAVHRLDPYDPPSSIQALASSPCLWGDEAVWTLDDHTNTLQLYH
AATYQLCATYSCGDANPLRDVFTVQRPAGVTMATSPDLDSKRKSLDEEEEECPNDKVTLI
YCEEAGTQIIQHQDSLTDYCSISSDSTPSLGFDRSGPLSEPLGLDRSSSCALSSLASSSS
MPFSTEEEERPQDQPDNPDPVVNSDPTTTFTTTPPTCRPSLCWLSMEPFGSPGKGFLEKA
QMAQSGSRSGGDVMVIEIQRQTGQLRGRVIAVLCPPGTSSYGTLEEAALVAKDTVVCGFR
NENRAWCLCVWRGWGPRELEVFYQSYEELGRLETSMRKRR
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atgtcctactggtcagtcggcctctccaaggccactggagacacacagagcaacaacatg
gaggaacaagagaaacacgatcttgaacaagatggttctttggcagtggaggacatggga
gccaaggcgtctgcgatgggcagcggtggggcctcctctctgggtccgtctccaaccctg
gagaacatccaggcagcgtacggagaaggggagagcagcagggcccgggagctgatccag
caagcctgctgtgtggagtgtagtgcagctagtcctcggctggaggggctgcgtctcctg
tgtgtggccacccagcatggtgatgaggagagcgtgagttacctcctccatgaggcccat
gtgcccctgcccctggagccatcggaggggaaccccgccatcctggctgcacactatgga
catgtcagcctggtcagagagctgctcgactcagtaccaggtccgtgtgtccacagagat
ctgttgaactggatgttggtgtcggcgtgccaacagggtcacctggaggtggttagaatg
ttggtacagggttaccatgctgacgctgaggactgtgccattcaccaggaggagtttgct
gtcatcacggggctgcctctctacgctgctgcacgcgcaggtaatgaggagatagctaga
ttcctgctgcagaatggcgctgggctgtcctcctacaccctgatggattatccagccttc
agcagactgctcgttgaacaacgactggtagaagaagcagacacacacacagaaccagcg
ggagaaaagctactatgtggccgttggtcaggtctgaagctgccgtggttggagctggac
tggttcatggacgtgtcgtcccgtatctcccacctggacctgtcctgtaacagcctcagc
tccctgccctccgtggttccctgggggctcatacagctccggaccctagacctctccaac
aacctgttcaaagagctgcacacagcaccgagctcacaggagatcatctgctccagactt
cgccaggtgaatctgtctcagaatgagttgaccagcttgccgtccggactgctccatctc
accagagtccagaggctctctgctgctaagaacaagctcacctccctgtttgacattcct
aatggtactaactggataggtctgcgtaagctggaggagctggatgtgtctgacaactgt
ctgaccagtcttccctctgctgttcttcactctttcaaatccctcacttccctcaaagtc
tgccggaacagactcaccagcttccctgacccctgggcctgccctctgaagcactgtcga
gcctcatccaacgccatcgagagtcttcccaataccatctccatcttctggagaactcag
ctgcaggagctggatttctcagacaacgtcatcaaggagctgccctcctatatattcgag
ctggaggccctggtctctctcagactgtgtaggaatcagatctccactctcccggcaccc
aacaagtggaaatgctctctgctcagaacccttgacctctccaggaaccatctgggcaag
actgaggagggacccaaaaccaggaagctggccttcctgaccacatggcaccggagagac
ccggacccagtatgcccaatcgagtttccagtaattttgcgggatgctttggaagtgctt
tccttgaacgacaaccagctggagtgtgtgccccagtccgtgtgtggcctgagaaacctc
atggagctctacctctccaataatccaggtattcgggagcttccagctgagttggggcag
ctctctaacctgtggcagttggacattgaggacctcaacatcactaatgttccccaggac
attaggaaagaaggtccagcatcagtgctgtccttcctccgagcccacctacggaaggcg
gagccctgtaagctgctgaagcttcttgtgattggtcctcctcgacagggaaagacagcc
ctcctggaggcgttgcagacgggcaggacctcccctttctcccctgcagaacgaaacatc
agcacagctacatgggaactggacagacccaatggggttaaagctagcgcggactccgtg
gcgttcaacgtgtgggacatcggcggtccggccaacatgtccacggtcaaccagtgtttc
ttcacggacaaggccctgtacgtcgtcatatggaacctagctctgggagaggaggctgta
gccagtctacagtcctggctgcttaacattgaggcgcgtgcccctaactctgcagtggtg
gtggtgggcacccacctggacctgatcgacaccaagttccgtacagagcgggtggccact
ctgagggcctacatcctggcactatgcaggtctccatcaggtgccagggccagtggctac
ccagacatcacctggaaacacctgcatgaggtatcgtgtaagacccaggagggtctggat
ggtctgaagaggttgatcttccaggtggcctgctacatgaaggacaacagcagcagttca
gctagcggacacaagctgctgggcagactgatcccaaagagctaccttacactgcagcaa
gcggtgctagatgagcggggtcggcgggacgcagaagacgaggtccagtacctgacagac
gcacagctggacctcgtcatagagcagaacccaggaagtgacatcagagactacgaggac
ctgcagaccgccatcagcttcctgatcgagacaggcaccatcctccacttcccagacacc
agtcacggcctgtgtaccctctacttcctctgtcccgtgtggctgtcggactgtctggaa
cggatcatccacctgaagagctcccgatcggtggcctggaacggggtgatccgagcggag
gatctgcgcatgctcctggtgggaacgggcttcacccagcagacggaggagcagtacttc
cagtttctggccaagtttgagattgctctgcctgtggccagcgatagttacctcctcccc
cacctccttcctcctaagcctgctatggacattcatggtttccgtcaagagaccgccaac
tccatccagcgcctcttcaagatgagcttcgtgccggcgggcttctgggaacgcttcatc
gcccgcatgctcatcagcctcaacgagatggacctccagtcctttgagcctaagaggaat
gctaagagtgagcggaggaggaccacggtgatctacagttttgcgggaacaggtagccaa
cagaggcaccgctgtagcaccttcagagtccgccgcagtcaaaccatctactggagagag
ggactactggtcacctttgatggagggtatctaagtgtggaatcgactgatgtcaactgg
aagaggaagaaaagcgggggcatcaagatcatttgccaatcagagaccagggatttttca
gccatggccttcattacggaccatgtcaattccctcatcgaacagtggttccctgccttg
acggccagtgagagtgatgggacccgattgattgagcagtacgccccctgtccccagtgt
tcctccatgagcagacagaaccaggggcctggggatctgggtgaacccccaaccaggggg
actgcagttgggagaagaggaggagaaggcagagaaaaagggggaggaagaggagggcac
ttcttcaacatggaggactgtgtgatcgctgccatgggccaggagtacatagtgtgtccc
cagcacaccaaccagcctgtgccccttcaggagctggtcccagagcttttcatgaccgac
ttcccctcacggttgttcctagagaaggcccagttggagtgtagtgaggaggagagtgat
atcctgggccaggggggcagtggaactatcatctatagagcctgttaccgtggccaacca
gtcgccatcaaacgctttcacttcaagaagtgcaggcagcagaccatcagcagtggtaca
gacaccatgatgaagcattttcagtccatggacgcgtgccggagcttctcagagttccgt
caggagaccagcatgctccactccctacagcacccgtgcatcgtgctgctggtgggaatc
agtattcacccgctctgcttcgccctgcagctggctcccctgggcagcctcaacattgtg
ctggaggacagacataaaggctccaggtacatgcccctgggtcacatgctcaccttcaag
gcagcctatcagattgcagcgggcctggcctacctgcacaggaagaacatcatcttctgt
gacctcaagtcagacaacatcctggtgtggtccctggaggtgtgtgacccggtgaatatc
aagctgtcagactacggcatctcgcgccagtccttccacgagggggcactgggtgtggag
ggcacgccgggctaccaggcccccgagatacgcccaggcatcgtttatgatgagaaggtg
gatatgttctcgtatgggatggttgtgtatgagttgctgtcaggttgtaggcctgcgttg
ggccagcaccagctccagatagctaagaagctgtctaaagggatccgtcccaccctggga
aacccagaggaagtccagttccactgtctgcatggcctgatgatcgagtgctgggacact
aagcctgagaagaggcccctggccatgcagtgtgtgaggcagatgcaggagcccagtttc
ccatgtctgaagtacctgctggcctgtgacacacactcccagctcttcctgtcccacttg
cagggacacagtgctgtgttctgggacggggacaaggacgacaggaactacagtgtggtg
aacgtagagacgggtcatgtagaggtgaagaggatgccgtgtccaggaaccaggctgagc
tgtcagatgaagatggataacaccttatggaccgccacagaggagcaggaagtgttcatc
tacagtctaaaggagatgtgtccactgagccagccccagaaacagatctcctgtcctgct
atagtcacctgtctgttccccgtgcctgccagagaccagacccaggcgtgtgtcttcatg
gggatgtcagacggtctggtggcagtgtactccctaatggatgacatgcctgtggaagga
gagacctacctgtgttctcacaccctcaatatgaccatgtttgggatggaggactctgac
cccagacagagaccatacccagtcaggagcatggtcctggtccacagtggatcccagctg
tggtactcccatggtccaggcctgctggtgatcgactgccggaccctccaggcggtgcat
cgtctggacccctacgacccaccatcctccatacaggccctggcctccagcccctgtctg
tggggggatgaggcggtgtggaccctggacgaccacaccaacaccctgcagctgtaccac
gctgccacctaccagctctgtgccacatacagctgtggagatgccaaccctctccgggac
gtgttcactgtacagcgacctgcaggggttaccatggctactagtcctgaccttgactca
aagaggaagagtctagatgaggaggaggaggaatgtcctaacgacaaagtgacgctgatc
tactgcgaggaggcgggaactcagatcatccagcaccaggattcgctgacggactactgc
tccatctcctctgactccaccccttcactgggatttgaccgatccggccccttgtcagag
ccgctgggattggacagatccagttcctgcgcgctcagctcattggctagttccagcagt
atgcctttttccactgaggaggaagagaggcctcaggaccaaccagacaaccctgaccct
gtggtgaactctgaccccaccacaacctttaccaccactccccccacctgcaggccctca
ctgtgctggctgtcaatggaaccctttggatccccaggaaaaggctttttagaaaaggcc
caaatggcccagtctggatccaggagtggtggtgacgtgatggtgatcgagatccagcgg
cagacaggacagctcagggggcgtgtcatcgctgtgctctgcccccccggaacttcctct
tacgggaccctggaggaggccgcactggtggcaaaggacacggttgtgtgtggctttcgc
aacgaaaatagggcctggtgcctgtgtgtctggcggggctggggcccccgtgagctagag
gtcttctaccagtcctatgaggagctggggaggctggagaccagcatgaggaaaagaagg
tag
DBGET
integrated database retrieval system
