Oncorhynchus tshawytscha (Chinook salmon): 112240579
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Entry
112240579 CDS
T05605
Symbol
als2a
Name
(RefSeq) alsin
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112240579 (als2a)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
112240579 (als2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
MORN
VPS9
PH
RhoGEF
FMP27-BLTP2_C
Motif
Other DBs
NCBI-GeneID:
112240579
NCBI-ProteinID:
XP_042162751
LinkDB
All DBs
Position
LG26:complement(52046575..52125671)
Genome browser
AA seq
1765 aa
AA seq
DB search
MMEYQKSPVKEESSRERGLLHLWRGYSSSVTPERVLLSRPVLQAALGISHGILLAEGGLV
YSFGDLTWRQGLRVSPTYPLLESVLSGQCVVSVAAGSFHCGAVTREGAVYMWGENSSGQC
GLSERGLVPDPSLVSMVDSEAVPPQIIRILEVTCGEQHTLALSTQNEVWAWGSGCQLGLV
TSVFPVWRPQKVEHLAGRHVVQVACGGYHSLALVRRFPAQDSQFPRPTATDKCSQCNQLL
FSMVDQEDHVIISHSHYCPLGIELADSKPGSCSRQASLAQRHRASACPLSQTVSLDLGLD
PDLAQDPDPIIVPEYLFPDDTDSSLRESGSKEQTNQEDTGTSDLQRQGPGTLTETDSNSA
RTQARRKTTSSTDEKELKEYLKRTSDHILSEQNDNNNTGNPITLANQTTGDSLTLANQTT
GDSLSLANQTAEDSLTLASHSSGDLLTLVSHVPGQCLNGDLPDQDQPSTLTPYLLPQSTD
DTTMASSLSCSLLENYTGALVMEHTLALTGRAASASPFEVNNPLGIGSTCSLCDSSKSEG
CIPVAGLCEALSGPVMAYRKTNQEVRLCMEEDSLQGKKCSSLTDILLEEVIEGSRRHSLP
PLLSHASPELPGRRSARSRPNVPRKEEVVESLPSLNTEVWSWGRGQEGQLGHGDQLPRLQ
PLCIKSLNGEEVVKVVAGTHHSLALSAQCQVFSWGSNRSGQLGHMNSPTTMPQQAKMSKG
LRVWDLAAGQSHSVFLADGDCCQPILCYSGQQVMETTPENHIPGTGSTESSPSRTDTYTL
RPVLLPFCVNMGYISSVYGGGQSCLAQADLNVMGFISALHELAAADRKYYCRLRDVNKRV
VSPLLRKESVCTVLGQTSSLLFQSLASSYSRLCHLTGQHSVSLTAFLHTDRDVKGLVILK
HANTFLDMYKEYCCSVGNFLVMGGFQALMKPSVECFGKKFEVLRQLSESSEDKVPLLDLL
VLLFYSPMQHIHEYARLLLKLATCFDVSTVEYQRLQEGCSKYEALSLSLGRKRKEAETTN
QFWRTYSGKTTDVLRNPQRRLVYESSNKSLTLQNAGRFSVNWFILFNDALIHAQGTIPSK
SFFSSHHVYSLATLWVEPITASSNLYGIKVTTPEESFTLIASSPQEKAKWLRAINQAVEA
VLTGEGSGPGVPAVSRTASYIFYKDLRLKDASYSGRWLSGKPHGKGIMKWPDGRKFTGTF
KQGLEDGYGDCIMPNKILNKSDRYQGHWRDGKMHGFGTYRYATGQVYEGSFHENIRQGHG
MLSSGKLIGSSSSVFVGQWLQDKKMGYGVFDDITRGEKYMGLWTDDQRQGSGVVVTQFGL
YYEGTFSNNKMVGTGLLVSDDDTAFEGEFSEDWTPNGKGYLSMSNGDSIEGLFSGEWTSG
LKITGTYMKPNLYELDKKQSTRVLELGRLAVCPEQKWKAVFSECWSRLGCEAPGQPEERM
RAWENIAVTLTTGRRDSPELLSRSQSRVLEKLEVIPQHTGPVTARGYDVIQRYLTKACET
PLHPLGGLLETLVTVYRITYIGVGSNRRLLQQAVEEIRSYLIRIFQLVRFLFPDLPDEGG
VIHPDPKGSSETDQQGLVVSSSTLLLPVLLPRLYPPLFTLYALDKEREEEVYWDCVLRLN
KQPDLGLLAFLGVLQKFWPVSVTVLGEKQQVLPSTKNACFASAVKTLQQISTTFTPSDKL
QVIQRTFEELTQEVQALLEGNFLLSMDDLLPLFLYVVLRARMRNLAAEVSLIEDLMDPYL
QHGELGLMFTTLKACCFQIQQEKTT
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtaccagaagagcccagtgaaggaggagagctccagagaacgaggcctgctc
cacttatggagaggctacagcagtagtgtgacccccgaacgggtgcttctgtcccgtcca
gtcctccaggctgccctcggcatcagccatggtatcctcctggccgaaggtgggctggtg
tacagcttcggggacctgacgtggcggcagggcctgagggtttctcctacttaccctctc
cttgagtctgtcctctctggtcaatgtgttgtgtctgtagctgcaggctccttccactgt
ggcgcagtcacacgggaaggggctgtgtacatgtggggagagaactcctcggggcagtgt
ggtctgtcagagagaggcctggtcccagatcctagcctcgtcagtatggtggactctgag
gctgtccctccacagatcatcaggatcctggaggtaacctgtggggagcagcacactctg
gctctgtctacccagaatgaggtgtgggcctggggcagcggctgccagctgggtctggtc
accagtgtgttccctgtgtggagaccccagaaagtggagcacctggctgggaggcacgta
gttcaggtggcgtgtggaggataccacagcctggccctggtgcgtcgcttccctgcacaa
gactctcagttccctcggccgacagctactgataagtgttcccagtgcaaccagctgctc
ttctctatggtggatcaagaggaccatgtcatcatcagccacagccactattgcccccta
gggattgagttggctgatagcaaaccagggagctgctcgagacaggcctctctagcccag
agacacagagcctcagcctgcccgctctctcagacagtcagccttgatctgggccttgac
ccagacctagcccaagacccagaccccattatagtcccagaatacctatttcctgatgac
actgacagttctctcagagagtctggctccaaagaacaaactaaccaagaggatactggt
acctctgaccttcaaagacaaggccctgggactttgacagagacagacagtaactcggct
cgaacacaggcgaggaggaaaaccacatcttcaaccgacgagaaggaactgaaggaatac
ctcaagagaacgtctgatcacatcctgtctgaacagaatgacaataacaacacagggaat
ccaatcaccttagccaatcagacaacaggggattcactcaccttagccaatcagacaaca
ggggattcactctccttagccaatcaaacagcagaggattcactcaccttagccagtcat
agctcaggagatctactcaccctggtaagtcatgtcccaggacagtgcctaaacggtgac
ctacctgatcaagaccaaccttctaccttaacaccatatcttctaccacaatctacagac
gacaccaccatggcatccagcctatcatgttcactactagagaactacacgggtgcctta
gttatggaacataccttagccttaacgggccgtgctgcctcagcctcacccttcgaggta
aacaaccctttaggcatcggctccacctgcagcctctgtgactcatctaagagtgaaggg
tgtatcccagtcgcagggctgtgcgaggctctgtctgggcctgtcatggcatacaggaag
accaaccaggaagtgcgtctctgtatggaggaggactccttgcaagggaagaaatgctcc
agtctgactgatatcctgctggaggaggtcatcgaggggagtagacggcactcattgcct
cctctcctctctcatgcatcccctgagctccccggcaggaggagcgcccgctccaggccc
aatgtgcccaggaaggaggaggtagtggagtctctgccctccctgaacacagaggtgtgg
agctggggccgggggcaggagggacagctgggccacggagaccagctacccaggctccag
ccgctgtgtatcaagagcctgaatggagaggaggtagtgaaggtagtggcaggaacacac
cactctctggccctttctgcacagtgtcaggtgttttcgtggggcagcaacagatccggc
cagttgggacacatgaacagccccactaccatgcctcaacaggccaagatgtcaaagggt
ctgcgtgtgtgggacctggcagctgggcagagccacagtgttttcctggctgatggtgac
tgctgccagcccatcctctgttacagcggtcaacaggtgatggagaccacacctgagaac
cacatacctgggacagggtcaactgagagctctccgtctagaactgacacgtacaccctc
agacctgtcctactgcccttctgtgtgaatatgggctacatcagcagtgtgtatggcgga
ggacagtcctgtctagcccaggctgacctcaacgtgatggggttcatctctgctcttcac
gagctggctgcagcagacaggaagtattactgcaggctcagagacgtcaacaagcgggtg
gtcagccctctactgaggaaagagtctgtgtgcacggtgttgggccagacgtccagcctg
ctgttccagtccctggctagtagctacagcaggctctgtcacctgacaggacaacactcc
gtctcccttacagccttcctccatactgaccgggacgtcaagggactggtcatcctgaaa
cacgctaacaccttcctggacatgtataaagagtactgttgctcagtgggtaatttcctg
gttatggggggattccaagccctcatgaagccctctgtggagtgttttggtaagaagttt
gaggttttgcgacagctgtcagagtccagtgaagacaaggttcctctgttggacctgttg
gtgttgctgttctactctcctatgcaacacatccacgagtacgccaggctgctgctcaaa
ctggccacctgtttcgatgtgagtacagtggaataccagaggctgcaggagggctgctcc
aagtatgaggcactgtctctcagcctggggaggaagaggaaggaggcagagacaacgaac
caattctggaggacatattctgggaaaactactgatgtcctccgtaatccccagcgcagg
ctggtgtatgagagtagcaacaagagcctgaccctccagaacgccgggaggttctctgtt
aactggttcatcctgttcaacgacgctctgattcatgcacagggtaccatcccttctaag
agctttttctcatctcatcatgtctactccctggccactctctgggtggaacccatcact
gccagcagcaacctgtatggaattaaggtgacaactccagaggagagtttcactctgata
gcatcctcacctcaggagaaggctaagtggctgagggctattaaccaggccgtggaggcg
gtgttgaccggagaggggagcggtcctggggtccccgctgtctctcgtaccgcctcctac
atcttctacaaagacctacgtctgaaggatgcctcctactcaggccgctggctgtctggc
aaaccccacggcaaagggatcatgaaatggccagatggcagaaagttcacggggaccttt
aaacaaggactggaggacggctatggagactgtataatgccaaacaagatcctcaacaag
agtgatcgttaccagggccactggcgagatgggaagatgcatggctttgggacatacagg
tatgctacaggtcaggtgtatgagggatccttccatgagaacatccgtcagggccatggg
atgctgagctctgggaagctgattggttcttcttccagtgttttcgttggccagtggctt
caagacaagaagatgggatatggagtgtttgatgacatcactagaggagagaagtacatg
ggcctgtggactgatgaccagcgacaaggcagtggtgtggtagtcactcagtttggtctt
tactatgaagggaccttcagcaacaacaagatggtgggtactggtctgctagtatctgat
gatgacacagcttttgagggagagttctcagaagactggacccctaatggcaagggttac
ctgtccatgtccaatggagactccatagagggtctgtttagtggagagtggacctcaggg
ctgaagatcacgggaacctacatgaagcctaatctctatgaacttgacaagaagcaatca
accagggtgcttgagttgggccgtctagccgtatgcccagagcagaagtggaaggcagtg
ttctcagagtgttggagcaggctgggctgtgaggccccgggacagcctgaggagagaatg
agggcctgggaaaacatcgctgttacactcaccacaggacgcagagacagtccagagctg
ctgagcaggtctcagagtcgagtcctagagaagctggaggtgattcctcaacacacaggt
ccagttactgctagggggtatgacgtcatccaacgatacctcaccaaggcctgcgaaacc
cccctccacccattgggggggttactggagaccctcgtgactgtgtacaggattacctat
ataggggtaggatctaacagaaggttgctacaacaggctgtggaagagatcaggtcctac
ctcatacggatcttccagctggtcaggtttctgttccctgacctccctgacgagggaggt
gttattcaccctgaccccaaaggatcctcagaaacagaccaacaaggcttggtggtgagt
agctccactctcctactaccagtcctgctgcccaggctgtaccctcctctgttcaccctg
tatgccttggacaaggagagagaggaggaggtgtactgggactgtgtcctgaggctcaac
aaacagcctgacctgggcctgttggccttcctgggggtcctacagaagttctggccggtc
tccgtcaccgtgttgggagagaagcagcaggtccttcccagcaccaaaaatgcttgcttt
gcttctgcagtgaagactttacaacagatcagcaccaccttcaccccgtcagacaagctg
caggtgatccagcgtacctttgaggagctgacccaggaagtacaagccctgctagagggg
aacttcctgttgtccatggatgacctcttacctctgtttctctacgtggtgcttagagca
cggatgaggaacctggctgctgaggtgagtttgatagaagatctaatggacccctatctg
cagcacggagagctgggactcatgttcaccacactcaaggcttgctgttttcagatccaa
caggagaagacgacatag
DBGET
integrated database retrieval system
