Oncorhynchus tshawytscha (Chinook salmon): 112240620
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Entry
112240620 CDS
T05605
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04136
Autophagy - other
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112240620
04136 Autophagy - other
112240620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112240620
03029 Mitochondrial biogenesis [BR:
otw03029
]
112240620
Membrane trafficking [BR:
otw04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
112240620
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112240620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
Beta-prop_Vps41
DUF7165
Motif
Other DBs
NCBI-GeneID:
112240620
NCBI-ProteinID:
XP_042170642
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MNLASQSGETGCSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAAVVFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
EGLYLSASSNTETVHIFKLETQKEKPTEEPTTWGGYFGKVLMASTTYLPSQVTEMFTQGR
AFATVRLPFSGHKNICALALIQKIPRLLVAAADGYLYLYNLDPQEGGECTLMKQHRLDGS
AEPPNEILEQGSHDRPLTAQTYNTAGMKGYCEEAGAVGGAGLEDDLSDLRLDDENEEQPP
LILETD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggctagtcagagcggggagaccggctgtagccagctcctcttcgccaacttt
aaccaggacaacacgtctttagctgttggaaccaaatcaggctacaagttcttctcccta
tcgtctgtggacaagttggagcagatttatgaatgtacggacacagaggatgtgtgtatt
gtagagcgtctgttcagcagtagtctggtggcgatcgtcagtctgaaggctcctaggaag
ctgaaggtctgtcacttcaagaagggaacggagatctgtaactatagttacagtaacact
atactggctgtcaagctcaacagacagaggctgatagtatgtctggaggaatctctgtac
atccacaacatcagagacatgaaggtcctgcacaccatcagagagacacctcccaacccc
tcagggttgtgtgctctctccatcagtaatgataactgttacctggcctaccccggcagt
gctacaataggagaggtccaggtgttcgacacggtcaacctgagggcagccaacatgatc
ccagcccatgacagtccattagcagctgtggtgtttgatgctagcggaaccaaactggcc
acagcctctgagaagggtacggtgattcgtgtgttctccatccctgagggacagaaactg
tttgagttccgtcgaggagtcaaaaggtgtgtatctatctgttccctggccttcagtatg
gaaggcctctacctatcagcatccagtaacacggagacggtccacatcttcaaactagag
acgcagaaagagaagccaacagaggagccgacgacatggggtggatactttgggaaggtc
ctgatggcgtccaccacctacctgccctctcaggtgacagagatgttcactcagggacga
gccttcgccaccgtacgactgcccttctctggacacaagaacatctgtgctctggccctg
atccaaaagattcctcgtctcctggtagcagcagctgatggatatctgtacctctataac
ctggacccacaggaggggggagagtgtaccctgatgaaacaacacaggttagacggcagt
gctgagccgcccaatgagatcctggaacaggggtcacatgaccgaccccttactgcacag
acctacaacaccgctgggatgaaaggttactgtgaggaggcgggtgccgtgggaggggcg
ggactagaggatgacctcagcgatctgcgattggacgatgagaatgaagagcagccgcca
ctcatcctggagacggactga
DBGET
integrated database retrieval system
