KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112240640
Entry
112240640         CDS       T05605                                 
Name
(RefSeq) LOW QUALITY PROTEIN: serine hydroxymethyltransferase, cytosolic-like
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00260  Glycine, serine and threonine metabolism
otw00630  Glyoxylate and dicarboxylate metabolism
otw00670  One carbon pool by folate
otw01100  Metabolic pathways
otw01200  Carbon metabolism
otw01230  Biosynthesis of amino acids
otw01240  Biosynthesis of cofactors
otw04981  Folate transport and metabolism
Module
otw_M00141  C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:otw00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    112240640
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    112240640
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    112240640
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    112240640
Enzymes [BR:otw01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     112240640
SSDB
Motif
Pfam: SHMT
Other DBs
NCBI-GeneID: 112240640
NCBI-ProteinID: XP_042171582
LinkDB
Position
Unknown
AA seq 484 aa
MSHSNGTSHHVSKDVWASHNKMMQEPLSSNDSEVFSIIKREKHRQTFGLELIASENFTSR
AVLEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQRRALEAYGLDADKWGVNVQPYS
GSPANFAVYTAIVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVDPDTG
LINYDRLEENARLFHPRLIIAGTSCYSRNLDYARLRRIADENGAFLLADMAHISGLVAAG
VVPSPFEYCDVVSTTTHKTLRGCRSGVIFYRKGIRSVDPKGKETLYNLESLINQAVFPGL
QGGPHNHAIAGVAVALKQALTPEFKAYQYQVLSNCRAMANALINHGYKIVTGGSDNHLIL
LDLRPNGTDGGRAEKVLEAAAIACNKNTCPGDKSALRPSGLRFGSPALTSRGMVEDDFRK
VAEFIHRGIQVTLDIQASLQPKATLKEFKEALAGEGKHQERVAELRXEVEAFAGXFPMPG
LEEL
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgtctcatagcaacggtaccagtcaccatgtcagtaaggacgtgtgggcgtctcacaac
aagatgatgcaggagccactcagctccaacgactctgaggtgttctccatcatcaagaga
gagaagcaccgtcagaccttcggcctggagctgatcgcatcagagaacttcacctccaga
gctgttctagaagccctgggctcctgtatgaacaacaagtactcagaggggtatcctgga
cagaggtactacggcggtacagaacatgttgatgagttggagcgtctgtgtcagaggaga
gctctggaggcctacggactggacgctgacaagtggggagttaacgtacagccatactca
ggctcccctgctaactttgctgtgtacacggcgattgtggagcctcatgggaggatcatg
ggtctggacctccctgatggaggtcacctgacgcacggcttcatgacggacaagaagaag
atctctgccacatccatcttctttgagtccatgccctacaaggtggatccagacactggt
ctcatcaactacgaccgactggaggagaacgcccggctgttccaccctagactgatcatc
gcaggtaccagctgttattcccgtaacctcgactacgctcggctgcgtcgtatcgccgat
gagaacggagctttcctattggccgacatggcacacatcagcggactggtggcggccggg
gtcgtcccgtctccgtttgagtactgtgacgtggtctccacgacgacccacaagacgctg
cggggctgtcgctctggggtcatcttctacagaaagggaatacgtagtgtggaccctaag
ggaaaggagactctgtataatctggagtctctcatcaaccaggcagtgttcccaggacta
cagggaggaccccacaaccacgccatcgcaggtgtggcggtggccctgaagcaggctctg
accccagagtttaaggcgtatcagtaccaggtgctctctaactgcagagctatggccaac
gccctcatcaaccacggctacaagatcgtcaccgggggttctgataaccatctgatctta
ctggacctgaggcccaacgggacggacggaggacgagctgagaaggttctagaagctgct
gccatcgcctgcaacaagaacacctgtccaggtgataagagtgcgttgcgtcccagcggt
ctgaggttcggctctcctgctctgacctccagaggaatggttgaagacgacttcaggaag
gtcgcagagttcatccacagaggtatccaggtgaccctggacatccaggcctctctgcag
cccaaggccaccctgaaggagtttaaggaggccctggcaggggaggggaagcaccaggag
agggtagcagagttgaggngggaggtggaggctttcgctgggnggttccccatgcctggt
ctggaggaactttaa

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