Oncorhynchus tshawytscha (Chinook salmon): 112240643
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Entry
112240643 CDS
T05605
Symbol
rhobtb1
Name
(RefSeq) rho-related BTB domain-containing protein 1 isoform X1
KO
K07868
Rho-related BTB domain-containing protein 1/2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112240643 (rhobtb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112240643 (rhobtb1)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
otw04031
]
112240643 (rhobtb1)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
112240643 (rhobtb1)
GTP-binding proteins [BR:
otw04031
]
Small (monomeric) G-proteins
Rho Family
RhoBTB
112240643 (rhobtb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
Ras
Roc
Motif
Other DBs
NCBI-GeneID:
112240643
NCBI-ProteinID:
XP_042172104
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLNQYQLLATHVPTVWAIDQYRVCQE
VLERSRDVVDEVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKTMWHM
EIKHFCPRTPVILVGCQLDLRYADLEAVNRARRPLARPIKPGDILPPESGREVAKELGIS
YYETSVFDQFGIKDIFDNAIRAALISRRHLQFWKSHLRKVQKPLLQAPFLPPKAPPPLIK
IPECVINNGEGPGLLLDSPLCADVMFILQDHIHIFAHKIYLSTSSSKFYDLFQMDFSDES
QCLVVTERHARDSLLRTLSLDTEEDVAVLPNLSPCSLRASKSDGTLKMMSFSGKHRRTKL
SLASWSKAFYSIHKESVTNPVTGSPAHMTVVKMDYSIQLGPFSAVLRFLYTGELDEEERD
LMKIAQIAEVLEVFDLRMMVENIMNHEGFMNQEITKAFHVRKSNRIKECLNKNTFTDVTF
RLEDGTINAHRPLLISSCDWMAAVFGGSFMESANNEVSFPGTSRVCMQAVLEYLYTNQLC
PMAELDPMELTALANRLCLPRLTALTEHYAVSELVKASKDGQDIDGEVLTYLELAQFHNA
NQLAAWCLHHICTHYNNVCANYRKEIKAKSAENQEYFEKHRWPPVWYLKEEDHYQRVRKE
REKEDMALNKHHSRRRWCFWSTSPAVA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggactacgagagacccaatgttgagaccattaagtgtgttgtggtgggggacaacgcc
gtagggaagacacggctgatctgtgctcgggcctgcaacaccactctgaaccagtaccaa
ctactggccacacacgtccctacggtctgggctatagaccagtacagagtgtgtcaagag
gtgttggagcgctccagggatgtggtggatgaggtcagtgtgtctctcaggctgtgggac
acctttggcgatcatcataaagacagacgcttcgcatacggaaggtcagacgtggttgtg
ctgtgtttctccatcgccaaccccaactctctgcatcacgtcaagaccatgtggcacatg
gagatcaagcacttttgtcccaggacgcctgtcatcctggtgggttgtcagctggacctg
cgttacgctgatctggaggccgtcaacagggccaggaggccactagccaggccgataaag
cccggagacatccttcctccagagagtggccgggaggtggccaaggagctgggcatctcc
tactatgagaccagtgtgttcgaccagtttggtatcaaggacatcttcgacaatgccatt
cgagccgcgctcatctcccgtcgacacctgcagttctggaagtcccacctccggaaggtc
cagaagcccctcctccaggcgcccttcctgccgcccaaagcaccgccccctctcatcaag
attccagagtgtgtcatcaacaacggggagggtcctggcctcctattggacagtcctctt
tgtgctgacgtcatgttcatcctccaggaccacatccacatcttcgcccacaagatctac
ctctctacctcctcctccaagttttatgacctgttccagatggacttcagtgacgagtcc
cagtgcctggtggtgacggagcggcatgcccgggactctctcctcaggacccttagtctg
gacacagaggaggacgtggctgtgctccccaacctctccccctgctccctccgggcctct
aagagtgacggcaccctgaagatgatgagcttctctggtaagcaccggcgcaccaagctg
tccttggcctcctggagcaaggccttctacagcatccacaaggagagtgtgaccaaccct
gtgacgggctccccggctcacatgacggtggtgaagatggactactccatccagctgggt
ccgttcagtgccgtgttgaggttcctctacactggggagctggatgaagaggagcgggat
ctgatgaagatcgcccagatcgcagaggtcctggaggtgtttgacctgaggatgatggtg
gagaacatcatgaaccatgaaggcttcatgaaccaggagatcaccaaggccttccacgtc
aggaaatccaaccgcatcaaggagtgtctcaacaagaacaccttcacagacgtcaccttc
aggttggaggatggaaccatcaatgctcacagacctctgctcatctcctcctgtgattgg
atggctgctgtgttcggaggatccttcatggagagtgctaacaacgaggtctcgttccca
ggcaccagcagggtgtgtatgcaggctgttctggagtatctctacaccaatcagctttgt
cccatggcagagctggaccctatggagctgacggccctggctaacagactctgtctcccc
agactgactgctctgacagaacactatgctgtgagtgagctggtgaaagcctccaaagat
ggacaggatatagacggcgaagtactcacctatctggaactggctcagttccataatgct
aaccagttagcagcttggtgcttacatcacatctgcactcactacaacaatgtctgtgcc
aactatcgcaaagagatcaaggccaaatctgcagagaaccaggaatattttgagaagcac
cgctggcccccagtgtggtacctgaaggaggaggaccactaccagcgggtgaggaaggag
agggagaaagaggacatggctctcaacaaacaccacagcagacgacgttggtgcttctgg
agcacctcccctgccgtggcctga
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