Oncorhynchus tshawytscha (Chinook salmon): 112240736
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Entry
112240736 CDS
T05605
Name
(RefSeq) iroquois-class homeodomain protein irx-3
KO
K24889
iroquois-class homeodomain protein IRX
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112240736
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
112240736
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
112240736
NCBI-ProteinID:
XP_024264752
UniProt:
A0A8C8ISU7
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Position
LG12:complement(72713447..72716883)
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AA seq
458 aa
AA seq
DB search
MSFPQLGYQYIRPIYPPERQGISNARAGTELSPSGTLSNVLSTMYGSPFAAAAQGYGAFL
PYSNDISIFNQLGAQYELKDSPGVQGHPGFAHHHPAFYPYGQYQFGDPSRPKNATRESTS
TLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRSRTD
EEGNVYNSDHEEGEEGDKREDEEEIDLENIDTENIENKDDLDDQDDLHADLKLDGRSDSE
ISDGYEDLQGPDQRFLKAVVKEGKDIHVDRGEHFHHHHHSFEIKASQPNGEQVKLNPVSI
NSPPSENNAAPAQKPKIWSLAETATTPDNPRKSPQMNGSNTVGPAAQTIISPHHRLISCP
VGKIQNWTNRAFSAHQLALLNSNHYLGLANQASANGLALYSRQQHTQDKSHSSDTAVTER
SSALEAEKKLLKTAFHPVHRRPQNQLEAAMVLSALASS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagctgggatatcagtacatccgaccgatatacccaccggagcgccag
ggtatcagcaatgcccgagccgggacggagttgagcccgtccgggacactctcaaacgtt
ctctcaactatgtatggatcacctttcgccgcagcagcacagggctatggagcatttctg
ccctattcaaacgatatatccattttcaatcaattgggtgctcagtatgagttgaaagac
agtccaggcgtacaaggacacccaggatttgcccaccatcacccagcgttttacccatat
ggccagtatcagtttggtgacccgtccagacccaaaaatgcgaccagggagagcacgagc
acactgaaggcctggctaagcgagcatcgtaagaacccctaccccaccaagggggagaag
atcatgctggccatcatcaccaaaatgaccctcacccaagtttccacctggttcgccaac
gccaggaggaggctaaagaaggagaacaagatgacatggactccccggagccgcacagac
gaagagggaaatgtttacaacagtgatcacgaggagggagaggaaggggacaagagggag
gatgaggaagagattgatttagaaaatatcgacacggaaaatatcgagaataaggacgac
ttggatgatcaggatgacctacacgctgatttaaaattagatggtagaagcgactctgag
atttcagacggctatgaggatttacaagggccggatcagagatttctgaaggctgtagtg
aaggagggcaaagacattcacgtggaccggggcgaacacttccaccaccaccatcactct
tttgaaattaaagcctcacaaccgaatggcgaacaagtgaaactcaatcctgtgtccatc
aactcgcccccatcagaaaataacgcggccccggcccaaaagccaaagatttggtctttg
gcggagacagcaacaactcctgacaatccccgcaaatctccacaaatgaatggcagcaac
acagttgggcccgcggcccagaccataatcagccctcaccacagactcatctcttgtcct
gttggaaaaatccagaactggacaaaccgagctttttctgcccaccagctcgcattactg
aactctaaccattaccttggactggcgaaccaggcttcggctaacgggctcgccctctac
agcaggcagcaacacacgcaggacaagagtcatagctcagacacagccgtcacagagaga
tctagtgccttggaagcagagaaaaagttgttaaaaacagccttccacccagttcataga
cggcctcagaatcaactcgaagcagccatggttctgtcagctctcgcctcctcctag
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