Oncorhynchus tshawytscha (Chinook salmon): 112240825
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Entry
112240825 CDS
T05605
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112240825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112240825
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112240825
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112240825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
112240825
NCBI-ProteinID:
XP_042171269
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MFSATRKRFVEGVESDYPDDTVYYGQTSMFPHPSDKDMLASPSPSSSGQLSQLGASLYGP
QSALGFPMRGMSNTAQLNRSLPQGNQLPSHVTPVSGVAPTMSLHTPPSPSRGILPMNTRN
MMNTPQQVGRQEVMVGGMPSGGRTNSLGSSGLGSPNRASPSIICMPKQQQSRQPFTINSM
SGFGMNRNPSFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRSRREGGGNPTPLLNP
LAGRAPYVGMVTKPSNEQSQDFSIHNEDFPALPGPNYKDPTSNNDDSKTNLNSSGKTSSS
TDGPKFPGDKSSTAQNNNQLKKGIQVLPDGRVTNIPGGMVTDQFGMIGLLTFIRAAETDP
GMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKL
AAIKLSRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKT
NAYERGTYYFFDCLNWRKVAKEFHLEYEKLEERPHVPSTFNYNPAQQAF
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgctaccagaaagaggtttgtagaaggggtggagagtgactaccccgatgac
acagtgtattatggccagacatccatgttccctcatccatcagacaaagacatgctggca
tctccatccccatcgtcgtcaggtcaattgtcgcagcttggtgccagtttatacgggcca
caaagtgccctagggttccctatgaggggcatgagcaacacggctcagttgaatcgtagc
ttaccacagggcaaccagctaccgagccacgttacccctgtctctggagtcgcccccaca
atgtccctccatactcctccctcgccaagcaggggcatcctgcctatgaacacgcggaac
atgatgaacacccctcagcaggtggggcgccaggaggtcatggtggggggcatgcctagt
gggggcaggaccaacagcctgggcagctcgggcctgggcagccccaaccgtgcctctccc
agcatcatctgcatgcctaagcaacagcagtcacggcaacctttcaccatcaacagtatg
tcggggtttggaatgaaccggaatccatcgttcggaatgaacaactcgttatccagcaac
atcttcaacggaacagatggaagtgaaaacgtgacaggtctggacttgtcagacttccca
gcgttagcagaccggagtcggagggaaggaggtgggaaccctactcctctcctcaaccca
ctggctgggagggctccttatgttggaatggtcaccaaaccctcaaacgaacagtcccaa
gacttctccatccacaacgaggacttccctgcactgcctggtcccaactacaaggacccc
acgtcgaacaacgacgacagcaaaacgaatctaaactcttcaggtaagacttccagcagc
acagacgggcccaagttccccggggacaagagctcaacagcccagaacaacaaccagttg
aagaaaggcatacaggtgttaccggacggtcgcgtgacgaacattcctgggggcatggta
acagaccagtttgggatgattggcttgttaacgttcatcagggcagcggagacagaccct
ggcatggtgcacctggcactgggcagtgacctgacaacactaggactcaacctcaactcg
ccagaaaacctgtaccccaagtttgcatctccctgggcgtcagcaccgtgtcgaccccag
gacatcgacttccatgttccatctgagtatttaaccaacattcacataagggacaagctt
gctgcaatcaaactgtctcggtatggggaggacctgctgttctatctttactacatgaat
ggaggagacctcctccagctgctggcagcagtagagctcttcaaccgggactggcggtac
cacaaggaggagcgtgtgtggatcacgcgggcgccgggcatggagcccactctgaagacc
aacgcctatgagagaggcacctactacttctttgattgtcttaactggaggaaagtagcc
aaggagtttcatctggaatacgagaagctagaggagagaccccacgtgccatccaccttc
aactacaacccagctcagcaagccttctga
DBGET
integrated database retrieval system
