Oncorhynchus tshawytscha (Chinook salmon): 112240879
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Entry
112240879 CDS
T05605
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
otw04210
Apoptosis
otw04530
Tight junction
otw04540
Gap junction
otw04814
Motor proteins
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112240879
09143 Cell growth and death
04210 Apoptosis
112240879
09144 Cellular community - eukaryotes
04530 Tight junction
112240879
04540 Gap junction
112240879
09142 Cell motility
04814 Motor proteins
112240879
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112240879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112240879
03036 Chromosome and associated proteins [BR:
otw03036
]
112240879
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112240879
04147 Exosome [BR:
otw04147
]
112240879
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112240879
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
112240879
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
112240879
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112240879
Exosomal proteins of other body fluids (saliva and urine)
112240879
Exosomal proteins of colorectal cancer cells
112240879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
112240879
NCBI-ProteinID:
XP_042175972
LinkDB
All DBs
Position
LG03:complement(77955653..77959256)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISMHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTRGGGDDSFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGIYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDIVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGEEDEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatttccatgcatgtgggccaagccggagtccagatgggtaacgcctgt
tgggagctgtactgcctggagcatgggatccagccggacggacagatgcccagtgacaag
actcgtggcggtggagacgactccttcaacaccttcttcagtgagaccggagccggaaag
catgtcccccgagccatcttcgttgatctggagcccactgtcatcgatgaggtgaggact
ggtatctatcgccagctgttccaccctgagcagctcattacgggtaaggaggatgctgcc
aacaactacgcccgcggtcactacaccatcggcaaggagatcattgacatcgtgctggac
aggacacgcaaactggctgaccagtgtacaggtctccaggggttcctcatcttccacagc
ttcggaggaggcaccggttctggtttcacctccctgctgatggaacgtctgtctgtggac
tacggaaagaagtctaagcttgagttcgccgtttacccagctccccaggtgtccacggct
gtggtggagccctacaactccatcctgaccactcacaccaccctggaacactccgactgt
gccttcatggtggacaatgaggccatctatgacatctgccgcaggaacctcgatattgag
cgtccctcgtacaccaacctcaacaggctcattggccagatcgtctcgtccatcactgcc
tccctgcgattcgatggagccctgaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccccctggccacctatgcccctgtcatctccgctgagaag
gcctatcacgagcagctgtcagtcgctgacatcaccaacgcctgcttcgagccggccaat
cagatggtgaagtgtgaccctcgtcacggcaaatacatggcctgctgtctcctgtaccgt
ggtgacgttgttcccaaagatgtcaactctgccatcgctgccatcaagaccaagaggagt
atccagtttgtggactggtgtcccactgggttcaaagtgggtatcaactaccagccccca
acggtggttcctggaggagacctggccaaggtccagagggccgtgtgcatgctgagtaac
accacagccatcgctgaagcctgggcccgtctggaccacaagtttgacctgatgtatgcc
aagagggcctttgtgcactggtacgttggtgagggcatggaggagggagagttctctgag
gccagagaagacatggcagccctggagaaggactatgaagaggtgggcactgacagcgtg
ggagaagaggatgaggagggagaggaatattaa
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