Oncorhynchus tshawytscha (Chinook salmon): 112240920
Help
Entry
112240920 CDS
T05605
Symbol
toporsa
Name
(RefSeq) topoisomerase I binding, arginine/serine-rich a
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112240920 (toporsa)
03036 Chromosome and associated proteins [BR:
otw03036
]
112240920 (toporsa)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112240920 (toporsa)
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112240920 (toporsa)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112240920 (toporsa)
UBL E3 ligases
112240920 (toporsa)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
112240920 (toporsa)
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
112240920 (toporsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
PWI_Topors
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-rbx1
RING_XB3-XBAT31
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
112240920
NCBI-ProteinID:
XP_024264905
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MAAAKMTLRLRKKSALDKSSEVLSAEASPDSKCPICLDRFNNMAYLDLCLHKFCFRCIHE
WSKNKAECPLCKQPFNSIYHSIQSEKDFKKYDLRPTENGSFGSFAGERFRYRTTLTGARR
QDQRRTSPPPDNGVMFEALTGASPPPRQDRGLRRMMARLAARRRAESEGRTVRSLREQEM
IKFRRALYRRGVRVRSVRDGGRSRDISAEFFQKNPACLHRLLPWLKRELVVLYGAHGSLV
NIVQHIIMSRITRYDMEDRAIHEELQPFLQARTDHFLHEFVNFARAPFNMEAYDQHAVYD
CPAPSSDEGSSSNSSVIAISEDEEEGDSVELDPMSGGALSQSTWDDETPGPSYSTTEPTR
ALLLSIRDSDSESSVGEECGAVLQPKAPRLTADSAWVKTDKDGQACTSSGDEDCIIVGFV
KPLAERTPELVKLSSDSEESVLEEIKDEVPRLLQHIRFTSLSPASSQGQCPGKAEGVERK
QDVSCSKERRNTSPSIRCETSSSKSASKNRGQTEKDGRRCHSRDRSRERPRSRSRDRGRR
SRSADRSRSTKSPAISINSDSTLSRGRRQSRSQSRDRSHTKWEKTRDNKDSSRSGRSHDS
SSHSYHWHYYSRESERDSSATLYTERRSYYSSSHRNIDCRSPSQSPDSHRRDKRRSRSRS
STCSPSGAHRKSRHEKPSGKRKYKSRHLEEPAPKDQSSKALDEPPSSTTSSYVKDKKKSK
EKRHRKSKEKSGGKRSRSLSVEIIFEGSSSEQTRKHQKKKKKHKKKGKRHRSKERTGSRK
HSPTVITIDSDSDQHSAAGANDANHTCPVSSSTSNSVLAPSTTTTTGNPADSGLLESMLQ
DWEQQIPPVGLDSGVLEAKPPINVAAASDTPTHSEGVLSQSASADEANSHSPSNDNTSHF
LEES
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcaaagatgaccttacggctacgcaagaagagtgccctggacaagtcctct
gaggttttgtctgccgaggcgtctccagactctaagtgccccatctgtctggatcgattc
aacaacatggcctacctcgatctctgcttgcacaagttctgcttccgctgcatccacgag
tggtccaagaacaaagctgagtgcccgctatgcaagcagccattcaactctatctatcac
agtatacaatcagagaaggacttcaagaagtatgacctgcggcccacggagaatggttcc
tttgggagtttcgcaggggaacggttccgctaccgcaccacgctgacgggggcgcgtcgg
caggaccagagaagaacatcccctccccccgacaacggggtcatgttcgaggccctaacg
ggggcttccccccctcctcgacaggaccgaggcctccgccgcatgatggcgcgcctggcg
gccaggaggcgggcagaaagcgagggccggaccgtgcgcagcctccgtgagcaggagatg
atcaagttcagacgggcgctctaccggcgaggggtgcgagtgcggagtgtgcgagacggt
ggccgttcccgggacatctcggcggagttctttcagaagaacccggcctgcctgcaccgc
ctgttgccctggctgaagagagagctggtggtgctgtacggcgctcacggctccctggtc
aacatcgtgcagcacattatcatgtcccgcatcacccgctatgacatggaggaccgggcc
atccacgaggagctgcagcccttcctccaggcccgcaccgatcacttcctgcatgagttt
gtcaacttcgcccgagcacccttcaacatggaggcctacgaccagcatgccgtctacgac
tgccctgcgccgtcctcggacgagggcagcagctccaactcctcggtgattgccatctcc
gaggatgaggaggagggcgattctgtggagctggaccccatgtccgggggcgccctgagc
cagtcaacatgggacgacgagacacctggaccttcgtactccacaacagaacccaccagg
gccctgctgctatccatcagagactcggactcagagagcagtgtgggggaggagtgcgga
gcagtgttacagccaaaggcccctcgcctgactgcggactctgcttgggtgaaaaccgac
aaggacggacaggcgtgtacctcctctggcgatgaggattgcatcattgtgggctttgta
aaaccccttgctgaaaggactccggagctggtcaagctgtcctctgactcagaggagtct
gttctggaggagatcaaagatgaagtgcccaggctgcttcaacacatccgcttcaccagc
cttagccccgcctcctctcaaggccaatgtcctgggaaggcagagggggtggaaaggaag
caagatgtatcgtgctccaaggagagacgtaacacctcaccctcaattagatgtgagaca
tcatccagtaagtcagcaagcaaaaacagaggacaaactgagaaagatggcaggagatgt
cacagtcgagatagatctagagagaggccacggtcgagaagcagagaccgggggaggagg
tccaggagcgccgaccgcagccgctcgaccaagagcccggctatctccatcaacagcgac
agcactctgtccagaggcaggaggcagtcacgctcccaaagccgcgaccgctcccacact
aaatgggagaagacgagggacaataaagatagcagccgatcaggccgcagccacgactca
tcgtcgcactcctatcactggcactactacagccgggagagtgagagggacagcagtgcc
acgctctacacagagaggaggtcctactactccagctcacacaggaacatcgattgcagg
tccccgagccagagtcctgattcccaccggcgggataagaggcgctccagaagtcgttcc
agcacctgttcgccgtccggcgctcacaggaagtctcgtcacgagaagcccagcgggaag
agaaagtacaaatcgagacacctggaggaacctgcccccaaagaccagtcctccaaagcc
ctcgacgagcctccctcctccaccacctcgtcctatgtgaaagacaagaagaagagcaaa
gagaagcgtcacaggaagtccaaggagaagtctggggggaagaggagcaggagcctcagt
gtggagatcatctttgagggcagctcctcggagcaaaccaggaagcaccagaagaagaag
aagaagcacaagaagaagggcaagaggcacaggagcaaagagcgcacagggtccaggaaa
cactcgcccactgtcatcaccatagacagcgacagtgaccaacattctgccgcaggcgct
aacgatgctaaccacacctgcccggtaagcagcagcacaagcaacagcgtgctagcgcct
agcacaaccaccaccacaggcaaccctgcagactctggcctgctggagtccatgttacaa
gactgggaacagcagattccacctgtgggtctggacagtggagtgctggaggccaagcct
cctataaatgttgctgctgcttctgacacacccacacatagtgagggggttctgtcccaa
tctgcctctgcggatgaggcgaactctcatagcccttcaaatgacaacacaagtcatttt
ttggaagaatcataa
DBGET
integrated database retrieval system
