Oncorhynchus tshawytscha (Chinook salmon): 112241042
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Entry
112241042 CDS
T05605
Name
(RefSeq) chromatin assembly factor 1 subunit B
KO
K10751
chromatin assembly factor 1 subunit B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112241042
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
112241042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WDR55
CAF-1_p60_C
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
B-prop_COPA_B_2nd
Beta-prop_EML
Beta-prop_HPS5
eIF2A
Beta-prop_DCAF12
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
112241042
NCBI-ProteinID:
XP_024264997
LinkDB
All DBs
Position
LG03:62547934..62558181
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AA seq
634 aa
AA seq
DB search
MKVITCEIAWHNKEPVYSLDFQHNSEGRIHRLATAGVDTTVRLWRVEMGPDGKAVVDFLS
NLARHTKAVNVVRFCPNSELLASGGDDSAILLWKLNDNKEPEQAPSFQEEEDSQLNKESW
SVVKTLRGHIEDVYDISWTRDGNFMVSGSVDNTAIMWDVTKGQKLCIFNDHKSYVQGVTW
DPLGQYVATLSCDRVMRVYSTQSRRKVYSVSKMSSGSAAEGEVKQYRMFHDDSMRSFFRR
LTFTPDGSFLLAPAGCVEAGENITNTTYVFSRKSLKRPIAHLPCPAKATLAVRCCPVYFE
LRTKKGEDGSAQPLPNTFGLPYRLVFAVASEDSIFLYDTQQTLPFGYVSNIHYHTLSDLT
WSRDGSFLAVSSTDGYCSFLSFSPGELGTPLKEPPVLEVVTPGNGLEKKGKKVATARTVS
PVPKTTESTAPIHPTPKEAPSTPISSLTSPGTPLTPGGEEKKNPGRAKTQPRRITLNTLE
GWGKPSTPKAPAASAPKTPTTASTSTPSTPQQPRLTLSTPNTPLAPSIAQPCLTPKAQCS
SGKTLGPSTPKASTTPKASTTPKGPAPRRISLTPVISRSPAAFSTPSSTEKAKHERPSPP
TDPVCQPPESKRTKTNTLAGKTGVAPASGSTPKP
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgataacatgtgagattgcgtggcacaacaaagaacctgtctacagtctggac
ttccagcacaactcagagggccgcatacacaggctggccacagcaggagtggacaccact
gtcaggttgtggcgtgtggagatggggcctgatgggaaagcagtggtggacttcctgtcc
aaccttgcacggcacaccaaggctgtcaacgtggtgcgcttctgccccaacagtgagctg
cttgcttctggaggagatgattcagccatcctgctgtggaagctgaatgacaataaggag
cctgagcaggccccgtcgttccaggaggaggaggatagtcagctcaacaaggagagctgg
agcgtggtcaagaccctgcggggacatattgaggatgtatatgatatcagctggacccgg
gatgggaacttcatggtctctggttctgtggacaacactgccattatgtgggatgtaaca
aagggtcagaagctgtgcatctttaacgaccataagagctatgtgcagggagtgacctgg
gacccgctgggccagtatgtggccacactcagctgtgacagggtgatgcgtgtgtacagt
actcagagcaggaggaaagtctacagtgtcagtaagatgagctctggatcagctgcggag
ggagaggtgaaacagtaccgaatgttccatgatgacagcatgaggtctttcttcagacgc
ctcaccttcacaccggacggctccttcctgctcgccccagcagggtgtgtggaggcgggg
gagaacatcaccaacaccacctacgtcttctccagaaagagcctcaagaggcccatagct
cacctgccttgccctgctaaagccaccctggctgtacgctgttgccctgtctactttgag
ctgaggaccaagaagggagaggatggcagtgcccagcccctgcccaacacgtttggcttg
ccctacagactggtgtttgctgtggcctctgaggattccatcttcctctatgacactcag
cagaccctacctttcggctacgtctccaacatccactaccacacactcagcgacctcacc
tggtctcgggatggttccttcctggcggtgtcgtctacagatggctactgctccttcctg
tccttctcccctggcgagctgggcacgcccctcaaggagccccctgtcctggaggtcgtc
acccctggcaacgggctcgaaaagaagggcaagaaggttgcaacggcccgcacggtgtcc
cccgtccccaaaacaacagagagcaccgcccctattcaccccacccctaaagaggccccc
agcacccccatctcctccctcacctcccctggcacccccctgacccctgggggagaggag
aagaagaaccctggtagggccaagacccagccccgtaggatcaccctcaacaccctggag
gggtggggcaagcccagcacccccaaagcgcctgctgctagtgcccccaaaacccccacc
acggccagcaccagcacaccctccacccctcagcagcctcgcctcaccctctctaccccc
aacacccccctcgccccctctatagcccagccctgcctcacgccaaaagcccaatgcagc
agcggtaaaaccctgggccccagcacccctaaagctagcaccacccctaaagctagcacc
acccctaaagggcctgcccccagacggatatctctaactcctgtcatctccagatctcca
gctgccttcagcacaccctcctccacagagaaagccaaacatgaacggccctctcccccc
actgaccctgtgtgccagcccccagagtccaagcggaccaaaaccaacaccctggcaggc
aagacaggggtggctccagcctcagggtcaacacccaaaccctaa
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