Oncorhynchus tshawytscha (Chinook salmon): 112241076
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Entry
112241076 CDS
T05605
Name
(RefSeq) microtubule cross-linking factor 1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112241076
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
112241076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TSC22
Motif
Other DBs
NCBI-GeneID:
112241076
NCBI-ProteinID:
XP_042163770
LinkDB
All DBs
Position
LG28:43763817..43926823
Genome browser
AA seq
2058 aa
AA seq
DB search
MESSSGSGISESTKPPNHQLEKKRLNRASSPARPFLKDVHSFRSSPKPTVIVPKSPKLTK
HQHSSPVPVSSNQSRITRRTPTGAKDNKPAAVKSHSTKSSTGTRKTVKVIQHAAPEHKTT
AASKPTSDSSPHLALKAKKSKIATLTASHHRPLSHGSPIRVPTGAIPVGRVSQTDSNSDL
SDCPSEPLSEEQRLTAAASSDGESGGSGSSDRDHVGADYPLQAGASATDAAGATACSGGV
SLRTAEGAVVAAAGKGGMSQAPGAGAHGHGGDGSKQGKSITSASFIKLECSKEIIEEDLI
REIEDLRSENDYLKDEVEELRAEMEEARDSYLEEEVYQVQELQRELDRSNKKCRILQYRL
RKAEQKSLRVAQTGHVDGELLRNLEQDIKVAKDVSVRLHNELENVEDKRTRAEDENELLR
QRIIEVEISNQALHNELDRTKETGTRRRGSRETFRDKKSMNQEDSADLRCQLQFSKEEST
LMRKKMAKLGKEKDKLEQEIQQYKSVYGDVDSPLPLAELAGGGPHSTREAELRLRLKLVE
EEANILGRKIVELEVENRGLRAENEDIRCQYERDCFGREPFSSMPSSPYGGDALESAGEL
RRHLQFVEEEAELLRRSISEIEDHNKQLISELNRFKFGPRDEEGEVGVMMMMKSGNGSNG
SGVVMMEELKAARMQINELSGKVMKLQYENRVLMSNVQRCDLAQHLGLRTGSPRDSDADS
DTGRRDSAEEEETGRLLLLHPKREGPVGGESDSEDLFEKTTTTSGFGSHKPSDELSGLSA
TELSNRRREDRETFTNVKREAERLGKTVDRLISDTESLIYDGKILITGGDSLSLALEGIK
EDTDPKPDSQVLDTINTRMKAFRTELHIFMEKVDHLGEGLRERGSDRDRGDDLSPLPNLT
ESSSFLSGVTSMSRDSPIGTLGRDLVTDFQSRSGVRDELEWRLGQERAVETQSQEGLPQG
PAQNRGAILGHTRYHRPLLASLRLEDEERRRLDPQGVRPRGGLDLTGLQAHEAPWVQERT
LLQQEVRLFRHNTIIFYMKLRWILMHWRLGKRTEAGEETAHAEMEGIPELILEHGEGETE
REDRDRSFTQLPQIDCSEPDSTTQLPSTERLQNQTQVGENRRVLHAVRSLLEEFRSELRE
EENRRCQLQQNYANDKASWEVKWAEMKCQVAQLEEERLEEKGEVRGEARGETQGGGGGDP
DWAFKQEREEHRCLLAESHSTSLDLHWKLQQGEKRWGRERRGLLERFDQERQEWDSNMRN
MHHEMERLQRELNVRRGSEGSPSDIKEGERAGGHRGVFSPQESPCKAPRSPRSPRFPRSA
IPGPVSLPTRSHSDSEAHEEQEAVVRFRGPTDNLFLDALTLDPLGGLKGPPPCRLDSDKR
FPCLNQALNEIPDREGPSKYQEEEEMGFGSLLRAKSVCSMRDFQRLMDSSPFLPDRGCHG
DRGRDDVTPPLSPDDLKYIEEFNSKGWDFPVPGPSPTPGHHTPTAMEAWAERPASEPFQP
ASWFLTTSATLTTNTQSSHEPPCPPHCQRSPLRGNGGNIGGGAGVHVSHSPTRSPGPSDQ
DYLYPKGTKGQGGGGVGEVEGASGIGGVGGPDEVFGDGRWPPSCHKELLEGGGGVGGPIP
TVGYASSLELQLSRNLSDDMKEVAFSVRNYRSGTSDHLEQQRQLRDMACQTNGFTTRGTQ
TTQTISVGLQTDILRTLTSSPHRCLTPKGGSTPISSPSRNIRKIQYSPVVQSKFERPCCS
PKYGSPKLQRKLSTSSKADLQGGASSSTAGPRAPTPTTPQKGASESAWARSTTTRDSPVH
TTINDGLSCLFNIIDHSPVAYEPPQCKFTKSPSRSRPTPLDPSPPGEPGLPPSDLKDPRY
LGAVQEFLRNVRGRSPSPVQLIVETQGGPGGTGGERTPEVLSIRQDLSAPPGYTLAENAA
RLLNKKLLEQSFREEKRLGSGGTGGSSAQGQGGYTREGRQAEGERNQSGCLEDLPRSPVA
PPLESCFLRPARPANRRPPSRWAVRSPSSSPRGWHDVTGRRFTFPMLTGTSKIEATCMLE
LDETGPGTGTRLEPSSSA
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atggagagctccagtggctccgggatcagcgaatccaccaaaccgccaaaccaccagttg
gagaagaaacggttaaaccgagcatcgtctccggccaggccgttcctgaaggatgtccac
tccttccgctcctcgcccaaaccaacggttatcgtaccaaaatcccccaaactgaccaag
catcagcactcttctcctgtgcccgtgtcatccaatcaaagccgcatcaccaggcgcacc
ccaaccggagcgaaggataacaaaccggccgcggtgaaaagtcacagcaccaagtcctcc
acaggcacgagaaagactgttaaggtaatccaacatgcagccccggagcataaaacgacc
gccgccagcaaaccgacatcggacagcagtccacacctcgccctcaaagccaagaagagt
aaaatagccactctgaccgcgtctcaccaccgcccactcagccatggctcaccaatccgc
gtcccaaccggtgctatccctgtcggcagggtcagtcagacggacagcaactccgatctc
tccgactgtccctctgagcccctatccgaagaacaacgcctgaccgcggccgccagcagc
gacggggagtcggggggctctgggtccagcgacagggatcatgtgggagcggattatcct
ctgcaggcaggagcatcagcaacagacgcggcaggggctactgcttgtagtggtggggtt
tcattgcgcaccgcggagggtgcggtagtggcagcagcggggaaaggcggcatgtctcag
gctccaggagcaggtgctcacggtcacggtggagatgggagtaaacaggggaaatcgata
acaagcgcatcatttataaaactggaatgcagcaaggagataatcgaggaggatttgata
cgggaaattgaagacctacgttctgaaaacgactacctcaaggatgaagtggaggagctg
cgtgcagagatggaggaggcccgggacagttacctggaggaggaggtgtatcaggtgcag
gagttacagagggagctggaccggtccaataagaagtgccggatcctccagtaccgtctc
cgtaaggcggagcagaagagcctcagagtggcccagactggacatgtagatggagagctg
ctacgcaacctggaacaggacatcaaggtggccaaagatgtgtcagtgcgtttgcacaac
gagctggagaatgtagaagacaagaggaccagggctgaagatgagaatgagctgctgaga
cagaggatcatcgaggtggagatctctaaccaggctctgcacaatgaactggacagaacc
aaagagactggtacacgacggagaggaagcagggaaacgtttagggacaagaagtctatg
aaccaggaggacagtgcagatctcaggtgtcagctgcagttctctaaggaagaatccacc
ctcatgcgtaagaagatggccaagctgggcaaggagaaggacaagctagagcaggagatc
cagcagtacaagtcagtctacggggacgtggacagccctctaccccttgcagagcttgca
ggtggtgggccccacagcaccagggaggctgagctacggctccgactcaaactggtggag
gaagaggcaaatattctggggaggaaaattgtagagctggaggtggagaaccgaggcctg
cgggctgagaacgaggacatccgctgccagtacgagagggactgtttcggccgggagccc
ttcagcagcatgccctcctccccgtacggcggagacgctctggagtcagccggggagctg
cggcgccacctacagtttgtagaggaagaggcagaacttctccggcggtccatctcggag
atcgaggaccacaacaagcagctgatctcagaactgaaccgcttcaagttcggcccgaga
gacgaggaaggcgaggtcggagtgatgatgatgatgaagtccggtaatgggagtaacgga
agcggtgtggtgatgatggaggagctgaaggcagccaggatgcagataaacgagctcagt
ggaaaggtgatgaagctacagtatgagaacagagttctgatgtccaacgttcagcgctgt
gacctggcccaacacctgggcctccgcaccggctccccacgggacagcgatgcagacagc
gacaccggccgccgagactccgcagaggaggaagagactgggaggctcctccttctacac
cccaagagggaggggcctgtcggtggcgagagcgactcggaggacctctttgagaagacc
accacaacctcagggtttggaagtcacaagccctcggacgagctcagcgggctcagcgcc
accgaactatctaatcgtaggcgagaagaccgcgagacgttcacgaatgtcaaacgagaa
gcagagcgccttgggaagaccgtagatcgtctcattagcgacacggaaagtctgatctat
gacggaaagattttaataacaggaggggacagtttgagtctggctctggagggcattaaa
gaagacaccgatcccaaaccagactcacaggtcctggacactatcaacacccgtatgaag
gccttccgtacagagctccatatcttcatggagaaggtggatcacctgggagagggcctg
agggagaggggaagtgaccgggatcggggagacgacctgtcacccttgcccaacctcact
gagtctagtagcttcctgtctggagtcacctccatgtcacgagactcgcccatcggcacc
ctgggacgggacctggtcacagatttccagtcacggtccggtgtgagggatgagctggag
tggcgtctaggacaggagcgagccgtggagacccagagccaggagggtcttcctcagggc
ccggcccagaacaggggagccatcctgggacacactagataccacagacccctcctggct
tctttaagactggaggatgaggagcggaggcggctggatccgcagggtgtgaggcccagg
gggggtctggatcttactggcctgcaggcccacgaggctccctgggtccaggaaagaacc
ctactgcagcaggaggtccggttgttcagacacaacaccatcatcttctatatgaagcta
cgctggatccttatgcactggaggctggggaagaggacagaggcaggggaggagaccgca
cacgcagagatggagggtattccagagctgatcttggagcacggagagggagagacggag
agagaggacagggacaggtcgtttacccagctacctcagatagactgctccgagcctgac
tccacaacccaactcccctccactgaacgcctgcagaaccagacacaggtgggggagaac
cgtagggtgctccatgcggtgcgctccctgttagaggagttcaggtcagagttgagggag
gaggagaacaggaggtgccagctgcagcagaactatgccaatgacaaggcttcctgggag
gtcaaatgggcagagatgaagtgtcaggttgctcagctggaagaggagagactagaagag
aaaggagaggtgagaggagaggccagaggggagacgcagggaggaggaggaggagaccca
gactgggcctttaaacaggaacgagaggagcaccgttgcctcctggcagagagccacagc
acctccctggacctccactggaagctgcagcagggagagaagaggtgggggagggagagg
agaggcctactggaacgcttcgaccaggagagacaagagtgggacagcaacatgagaaac
atgcaccacgagatggagaggctacagagagagcttaacgtacggaggggcagtgagggc
tcaccatccgacatcaaagaaggggagagagcaggaggacacaggggtgtcttttccccc
caggagagcccatgcaaggcccctcgctccccaaggtcaccacgctttcctcgctctgcc
atcccaggccctgtttccctccccacccgctcccactccgactcggaggcccatgaagag
caggaggctgtagtgaggttcagaggcccaacggataaccttttcctggacgctctgaca
ctggaccccctgggtggcctgaagggcccacctccctgcagactggactctgacaagagg
ttcccctgtttgaaccaggctctgaatgagatcccagacagagagggcccctcgaagtac
caggaggaggaggagatgggttttggcagcctgctcagggctaagtcggtatgttccatg
agggacttccagcgtctgatggacagctctcccttcctgcctgacaggggttgtcatggt
gaccgtggccgtgacgatgtgactccgcctctgtcacccgatgacctgaagtacattgag
gagttcaacagtaagggttgggacttccctgtccctggcccatccccgacaccaggccac
cacacccctacagccatggaggcctgggcagaacggcccgcttcagaaccattccagccg
gcctcgtggttcctaaccaccagcgccactttgaccaccaatacccaatccagccacgag
cccccctgcccaccacactgccagcgctccccactcaggggaaacgggggtaacatagga
gggggagcaggggtacacgtctcccacagccccacccgatcccccgggccctccgatcaa
gactacctgtaccccaaaggaactaaggggcaagggggtgggggtgttggtgaagtagag
ggtgcctccgggattgggggggtaggaggtccagacgaggtgtttggtgatggtaggtgg
cctccttcctgtcataaggagttattagagggtggggggggggttgggggtcccatcccc
acagtggggtacgcctcgtctctggagctgcagctgtcacggaacctcagtgatgacatg
aaggaggtggccttctccgttagaaactaccgctctggcacctcggaccacctggagcaa
cagagacagctccgagatatggcgtgtcagacaaatggtttcaccactcggggaacccag
accactcagaccatcagcgtggggttacagacagacatcctccgcaccctcaccagctcc
ccccaccgctgcctcacccctaaaggaggctccacccccatctcctccccctccagaaac
atccgtaagatacagtactctcctgtagtccagtccaagttcgagcgtccatgttgttct
cctaagtacggctcccctaagctccagaggaagctgtcaacatcatcgaaggctgacctc
caaggtggggcctcaagctccacggccggccccagggcccctacccctaccaccccccag
aagggtgcctctgagtcggcctgggctcgctccaccaccaccagggactctccggtccac
accaccatcaacgacggcctgtcttgtctcttcaacatcatagaccacagccccgtggcc
tacgaacccccgcagtgcaaattcaccaagtcccccagccgctcccgccccacccccctt
gacccctcacctcctggtgaacccggtctacccccctcagacctcaaagatccaagatac
cttggagctgtccaggagtttctgaggaatgtccgcgggcgttctcccagcccggtgcag
ctgatagtagagacccagggagggccgggggggacagggggggagaggacaccggaggtg
ctcagtatacgccaggacctgtctgctccgcctggatacaccctggcagagaacgcagcc
cgtctgctgaacaagaagctgttggaacagagcttcagggaggagaagagactggggtct
ggagggactggtgggtcctcagcccagggacagggaggctacacgagagaggggcgacag
gcggagggagaaaggaaccagtcggggtgtttggaggacctccctcgttccccggtggct
ccacccctggagtcgtgtttcctgcgtccggcgaggccagccaaccgccgccccccctcc
cgctgggcagtccgttctccctcctcctccccccgaggctggcacgatgtcacagggcgg
aggttcaccttccccatgttgactgggaccagtaagattgaagccacctgtatgctggag
ctggacgagactggaccaggaacaggaacaagactggaaccatcgtcttctgcatga
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integrated database retrieval system
