Oncorhynchus tshawytscha (Chinook salmon): 112241120
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Entry
112241120 CDS
T05605
Symbol
ctnnd1
Name
(RefSeq) catenin delta-1 isoform X1
KO
K05690
catenin (cadherin-associated protein), delta 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112241120 (ctnnd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
112241120
NCBI-ProteinID:
XP_042171835
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MEQCESAASLLASVREQERQFERLTRALEEERRCGGTLPRPPPNLQNGRVSCDADIERLA
PNEGYVNGTHVSCYRMEPGQVVQETVTLEEDPHEVPPVISVETSEDGTTRRTETTVKKVV
KTTMTRTVIPSVSDNLSLDGGGSMTGVGGYTTPMERVYRQPGPPMDYPTNTVPRNYHYGP
PGGYEDYRQGPPSIGETYASLSRGARMDDRYRPADGYRTLDSGYRAISRNQLDPYAAQPQ
VGRMGSALELSGMPRFVPEPYGLEDDQRSLGYDEADYGMGPAIHYGTVPRNQQAFNHGPP
RRTGSYEGTLDGDMSGAGDMYYWGGAPLAQGERGSMASLDSTLRKGPATSWRQPELPEVI
AMLNYRLDPVKSNAAAYLQHLTFKNDKVKTDVRRMKGIPSLVSMLDNPKKEVHHAACGAL
KNISYGRDPDNKIAIKNCDGVPALVRLLRKTRDQDLTDTITGTLWNLSSHDSVKMEIVDH
ALHALSDEVMVAHSGWERGNEAGGEENLKPRHLEWETSLTNTAGCLRNVSSERSEARRKL
RECTGLVDSLMYIVQSQINLKDVDNKLIENSMCLLRNLSYQVHREVPGAERYQEAMSLNQ
GPAPSTGKTNRFSSRRGKDDWCSKGRNEDGADMIDIPKRTTPAKGYELLFQPEVVRVYTS
LLKESKNPTVLEASAGAVQNLCAGRWTYGRYIRALLRQEKGLPMMTELLAHGNDRVVRAM
SGALRNLAIDARNRDLLGKHAVPHLVSNLPGGGQSQPVRALSEETVVSVLSTLHEVLGSS
LDAAKILRASQGIERLVLINKDGNRSEREVRGAGLILQLVWGYKELRKTLEKDGWKKTDF
MVNLNPPNSTQPRVNGGYEDSTLPLIDRGGGDKRDMIPLNDMGPDAYSTLDQRGRKNTLD
GTLEPADKDTAQGGLYEERRDSVPLMDSYDEKLIVCITRREQPLPAYCPC
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtgtgagagtgcagcctctctcctggcctccgtgcgggagcaggagcgtcag
tttgagcgtctgactcgcgctctggaggaggagagaaggtgcggaggcaccctcccacgc
cctccccccaatctacagaatgggcgtgtttcttgtgatgcggacatagagaggctcgca
ccgaacgagggatacgtcaacgggacacatgtaagctgttacaggatggagcctggtcaa
gtcgtccaggagacggttaccttggaggaggacccgcacgaggtgccccccgtcatctcc
gtggaaaccagcgaagatggcaccacgcgccgcacagaaactacggtaaagaaggtagtg
aagactaccatgactcgtacagtcatcccctctgtgtctgacaacctctccctggatgga
ggggggtctatgacaggtgtagggggttacaccacccccatggagcgggtctacagacag
ccaggtcctcccatggactaccccaccaacaccgtgccccgaaactaccactacggaccc
ccgggagggtacgaggactaccgccagggccctccctccataggggagacctacgccagc
ctgagcaggggagcacgcatggacgaccgctacaggccagctgatgggtaccggaccctg
gactcaggatacagagccatcagcaggaaccagctggacccatacgcagcacagccacag
gtgggtcgtatgggcagtgcgttggagctgtctgggatgccgaggtttgtcccagagcca
tacggtctggaggatgaccagaggagtctgggatatgacgaggcagactacggcatggga
ccagccatccactacggaacagtaccacgcaaccaacaagccttcaaccacggaccgccc
cgcaggacagggagctatgaagggactcttgacggagacatgagtggagcaggggacatg
tactactggggaggtgcacccctggcccagggagagaggggtagcatggcctccttggac
agcaccctgaggaaaggccccgccacttcctggagacagcctgagctgccggaggtcatc
gccatgctcaactacagactggaccccgtcaagagcaacgctgccgcatacctgcagcac
ctcacctttaagaacgacaaggtgaagacagatgtccgtcgtatgaaaggtatcccatcc
ctggtgtccatgttagacaaccctaagaaggaggtccaccacgccgcctgcggagcgctc
aaaaacatctcttacggacgagaccctgacaataagatcgccatcaagaactgtgatgga
gtaccggccctggtcagactgctgaggaagaccagagaccaggacctgaccgatactatc
acaggcacgctgtggaacttgtcgtctcacgactcagtgaagatggagatcgttgaccac
gccctgcacgccctctcagacgaggtgatggtagctcactcgggctgggagagagggaac
gaggcaggaggagaggagaacctcaaaccacgacatctggagtgggagacgtccctcacc
aacacagctggctgcctgaggaacgtgagctcagagcgcagtgaggccaggaggaagctg
agagagtgcacaggattggtcgactcgctcatgtacattgtccaatcacagatcaacctg
aaagacgtggacaacaagctgatagagaacagtatgtgtctgctgaggaatctgtcctat
caggttcaccgggaggtgccgggcgctgagcgctaccaggaagccatgtccctcaaccag
ggccccgccccctccactggaaagaccaaccgcttcagctcccgcaggggcaaagatgac
tggtgttctaaagggagaaatgaagacggagcagatatgattgacattccaaagaggact
acacctgccaaaggttatgagttgttgttccagccagaggtggtgcgtgtctacacctct
ctgctgaaggagagtaagaaccccaccgtgctggaagcctccgccggagccgtgcagaac
ctgtgtgccggacgctggacctatgggcggtatatccgtgcgttgttgcgtcaggagaag
ggtcttcccatgatgacagagctgttggcccatggcaacgaccgggtggtcagggccatg
tctggagctctgaggaacctggctatcgacgctcgcaacagagacctgcttggtaaacat
gcagttccccacctggtatccaacctgcctggtgggggtcagagccagcctgtgagggct
ctgtcagaggagacggtggtgtctgtactgagcacccttcatgaggttctgggctccagc
ctggacgctgccaagatcctcagagcctcgcagggcatcgagagactggtgctcatcaat
aaggacgggaaccggtcagagcgagaggtgcgtggtgcaggcctgatactccagttagtt
tggggctataaggagttgaggaagaccctggagaaggatggctggaagaagacagacttc
atggtgaacctcaacccgcccaacagcacccagccccgggtcaacggaggatatgaagac
agtacgctgccgctcatagacaggggaggaggagacaagcgagacatgattccactaaat
gatatgggaccagatgcctactccacactggaccagagggggaggaagaacactctggac
ggaacactggagcctgctgacaaagacacagcacagggagggctgtatgaggagaggcgg
gactctgttcctctcatggactcttatgacgagaaactgatagtgtgcatcactagaaga
gagcagcctctaccggcctactgcccctgctga
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