Oncorhynchus tshawytscha (Chinook salmon): 112241154
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Entry
112241154 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase arih1 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112241154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112241154
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
112241154
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
112241154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_14
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
112241154
NCBI-ProteinID:
XP_042173969
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MDSDEGYNYEFDEEEEECSEDSAEEDPEDDTLEVELDDPVVAGGERDECGETGGSGLGPG
QDEEDYRFEVLTAEQILQHMVECIREVNDVIQNPATITRILLSHFNWDKEKLMERYFDGN
LDKLFSECHVINPSKKSRTRLMNTRSSAQDLPCQICYLNYPNSYFTGLECGHKFCMQCWG
DYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITESKVKLKYQHLITNSFVECNRLL
KWCPAPDCHHVVKVQYPDAKPVRCTCGRQFCFNCGENWHDPVKCKWLRKWIKKCDDDSET
SNWIAANTRECPKCHVTIEKDGGCNHMVCRNQSCKAEFCWVCLGPWEPHGSAWYNCNRYN
EDDAKAARDAQESQALSLLLLLQRSRAALQRYLFYCNRYMNHMQSLRFEHKLYAGVKAKM
EEMQHHNMSWIEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSIIFENNQADLENAT
EVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggactcagacgaagggtacaattatgaattcgacgaggaggaagaggaatgcagcgaa
gacagcgccgaggaggatcccgaagacgacaccctggaagtggagttggatgatcctgtt
gtggccggtggagaacgagatgaatgtggggagaccggaggcagtggcctagggcccggt
caagacgaagaggattatcggttcgaggttttgactgccgaacagatccttcagcatatg
gtcgagtgtatcagggaggtcaatgatgtcatccagaaccctgcaacgataacaagaata
cttcttagtcacttcaattgggacaaagagaaactgatggaaagatattttgatgggaac
cttgacaaattgttctcggaatgccatgtcatcaaccccagtaagaagtcgaggacacgg
ctgatgaacacgaggtcctctgctcaggatcttccctgtcagatctgctacctgaactac
ccaaactcgtacttcactggcctggagtgtggacacaagttctgcatgcagtgttggggt
gactacttgactaccaaaatcattgaggaggggatgggacagacaatttcctgccctgct
cacagctgtgatatattggtggacgacaacacagtcatgagactgatcacagagtccaag
gtgaagttgaagtaccaacatttgattaccaatagttttgtagagtgcaatcgactgtta
aaatggtgcccagcgccagactgtcatcacgtagtcaaagtccagtacccagatgctaag
cctgtgagatgcacatgtggccggcagttctgcttcaactgtggcgagaactggcatgat
cccgtcaagtgtaagtggttgaggaaatggatcaagaagtgtgacgatgacagcgagacg
tctaactggatcgcagccaatacaagggagtgccccaaatgccacgtgaccattgagaag
gacggcggctgcaaccacatggtgtgtcggaaccagagctgcaaggccgagttctgctgg
gtctgcctggggccctgggaaccacacggctctgcctggtacaactgcaaccgctacaat
gaggatgatgccaaggcagcgagggacgcccaagagagccaggcgttgtccctcctcctc
ctcctccagcggtccagggcagccctgcagaggtacctgttctactgcaaccgttacatg
aaccacatgcagtcgctgcgcttcgagcacaagttgtacgccggggtcaaggccaagatg
gaggagatgcagcatcacaacatgtcctggatcgaggtgcagttcctgaagaaggccgtg
gacgtgctgtgtcagtgtcgctccacactcatgttcacctacgtcttcgccttctacctc
aagaagaacaaccagtccatcatctttgagaacaatcaggctgacttggagaacgctacg
gaggttctgtctggatatctggagcgggacatctcccaggactctctgcaggacatcaaa
cagaaagtacaggacaagtacagatactgtgagagtcggcgtcgggtgctgctgcaacat
gtgcatgagggctatgagaaggacctctgggaatacatagaagattaa
DBGET
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