Oncorhynchus tshawytscha (Chinook salmon): 112241346
Help
Entry
112241346 CDS
T05605
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112241346 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112241346 (myo5aa)
04131 Membrane trafficking [BR:
otw04131
]
112241346 (myo5aa)
03029 Mitochondrial biogenesis [BR:
otw03029
]
112241346 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112241346 (myo5aa)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112241346 (myo5aa)
mRNA cycle factors
P-body specific factors
112241346 (myo5aa)
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Myosins
112241346 (myo5aa)
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112241346 (myo5aa)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112241346 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
Myosin_N
AAA_22
HTH_17
Motif
Other DBs
NCBI-GeneID:
112241346
NCBI-ProteinID:
XP_042187001
LinkDB
All DBs
Position
LG12:75206346..75308045
Genome browser
AA seq
1877 aa
AA seq
DB search
MEKGHDSSTSMAASELYTKFARVWIPDADEVWKSAELTKNYKHGDSTLHLTLEDGMDIEH
KLDDKTKNLPHLRNPDILVGENDLTALSYLHEPAVLHNLKVRFTDSKLIYTYCGIVLVAI
NPYENLPIYGSDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKT
VSAKYAMRYFATVSGAATEANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDK
RYRIIGANMRTYLLEKSRVVFQADEERNYHIFYQLCASSHLPEFKNLKLGSADVFHCTNQ
GRNPVIDGVDDAKEMCTTQHAFSLLGINELNQKGLFQVLAAILHLGNVEIKDRDSDSSII
PPNNRHLTVFCELMGVTYQDMSHWLCHKKLKTAQETYIKPIPRLQASNARDALAKHIYAK
VFNWIVDHVNKSLRATVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVF
KLEQEEYLKEQIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDSWAQKLYNT
HLKTCSLFEKPRMSNKAFIIQHFADKVQYQCDGFLEKNKDTVNEEQINVLKASKLKLDLL
VELFQDEAKVTSPTGTAPGGRTRLSVKPKEVRSGASSKEHKKTVGCQFRNSLAMLMETLN
ATTPHYVRCIKPNDLKFPFTFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYR
VLMKQKDVLSDRRLTCRNVLEKLVQDQDKYQFGKTKIFFRAGQVAYLEKLRADKLRKACV
RIQKTIRCWLVRKKYLRKKHAAITIQRYTRGHQARCLVKYMRQTLAAITIQKFQRMCVQR
KVYLQKQAAALVMQTILRAYMARQKYQGLLRNHKAVFIQKHVRGWLARQRYKRSLRAIVY
LQCCIRRMKAKKELKKLKIEARSVEHFKKLNVGMENKIMQLQRKLDEQAKDNRVTSERLN
CLETSHAVESEKLKVEVSKLKGIEEEAKNNANRVTSLLEQLERLRKELTTTQKEKKTIED
WATKYRDEMEKMVAELKQQNGLLKTEKDDLNRMIKEQSQQMTEKMTRALAEETQQLESDL
NEERSRYQNLLTEHLRLEERYDDLKEEITLSVSVPKPGHRRTDSTHSSNGSECTYNSEFA
ESEESSRHGEDVTRGMDTSLTLKLQKRVTELEQEKSSLRNELENKEEQFQRARVRDDEEH
KKSRGAELEYESLKRQELDSENKKLKHDLTAMRQSLLGNAGAGAGAPGSPPYKVLMDQLN
SSCEELEVRKEEVLILRSQLVSQKEAMQHKDEKETMTEPVHYAEDVHKMKDSGAITQAYL
GLKETNRSPRFLRKPLEANELLNRLRLLEGQMQQQRRSYDNEVEVLRGELQSVKEENNRQ
QQLLAQNLQLPPEARIEASLQHEITRLTNENLEMLRTEDPTAYRSAKVNILRRMVDLMEQ
LEKQDKTIRKLKKQLKVFSKKIGEMGAGHVETISPGQMVEETVRPVNIPRREKDFQGMLE
YKKEDELKLVKNLILELKPRGVAVNLIPGLPAYILFMCLRHADYVNDDQKVRTLLTSTIN
SIKKILKKRGDDFETVSFWLSNTCRFLHCLKQYSGDESFMKHNTPKQNDHCLSNFDLAEY
RQVLSDLAIQIYQQLIKCMENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEGT
YTLESILRQLSAFHSTMCQHGTDPELIKQVVKQQFYIIGAVTLNNLLLRKDMCSWSKGMQ
IRYNVSQLEEWLRDKSLMLCGAKETLEPLIQAAQLLQVKKKTDEDAEAICSMCNSLSTSQ
IVKVLNLYTPVNEFEERVSVTFIRTIQTRLRDRCETPQLLMDTKIIYPVTFPFNPSSLAL
ETIQIPGSLNLAFLTRV
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggacacgacagctccaccagtatggcagcgtcagagctgtacacaaagttt
gctcgggtgtggatccctgatgcagatgaggtgtggaagtcagcagagctcactaagaac
tacaaacatggagattccaccctacacctcacactggaggatggaatggacattgagcac
aagctggatgataagacaaagaaccttcctcacctccggaaccctgacatcctggtgggg
gagaatgacctcacagctcttagctacctccacgagcctgccgtcctgcacaaccttaaa
gtccgcttcaccgactccaaactcatctacacatactgtggtattgtgctggtggccatt
aatccctatgagaaccttcccatctacggtagtgacatcatcaatgcgtacagtggccag
aacatgggagacatggaccctcacatcttcgctgtggctgaggaggcttacaaacagatg
gccagagatgagaggaaccagtctataatcgtaagcggtgagtctggagcagggaagact
gtctcagctaaatacgccatgcgctactttgctacggtcagtggagcagccacagaggcc
aacgtagaggagaaggtcctcgcatccaaccccatcatggaggcgataggaaacgctaag
acgactcgtaacgacaacagcagtcgtttcgggaagtacattgagatcggcttcgacaaa
cgctaccgtatcattggagctaacatgaggacatatctactggagaagtctagagtggtg
tttcaggcggacgaggagaggaactatcatatcttctaccagctgtgtgcgtcctcccat
ctaccagagttcaagaatctgaagctaggtagtgctgatgtcttccactgcaccaatcag
ggccggaacccggtcatcgatggagtcgacgatgctaaagagatgtgcacaacacaacat
gccttctcactgctaggcatcaacgagttgaaccagaaggggctgttccaggtcctggct
gccatcttacatctgggcaacgtggagatcaaggatcgagactctgacagcagcatcata
cctcccaataaccgccacctgacggtgttctgtgagctgatgggcgtgacctaccaggac
atgtctcattggctgtgccacaagaagctgaagacagcccaggagacctacatcaagccc
atccctcggctgcaagcctccaatgcccgcgacgcgctcgccaaacacatctacgccaaa
gtcttcaactggatcgtggaccatgtcaacaaatctctacgcgccaccgtcaaacagcac
tccttcataggagtcctggatatctatgggtttgagacgtttgagatcaacagttttgaa
cagttctgtatcaactatgctaatgagaaactgcaacagcagtttaacatgcatgtgttc
aagctggagcaggaggagtatttgaaggagcagattccctggactctgatagacttctat
gataaccagccatgtatcaacctcatagaggccaagatgggggtactcgacctgctggac
gaagagtgcaagatgcctaaaggttcagatgactcgtgggcccagaagctgtataacacc
catctgaagacctgctctctgtttgagaaacctcgcatgtccaacaaagccttcatcata
cagcacttcgctgacaaggtgcagtaccagtgtgatggctttctggagaagaacaaggac
acagtgaatgaagagcagatcaatgtcctgaaggccagcaagctaaagttggacctgcta
gtggagctgtttcaggatgaggcgaaagtgaccagtccaactgggaccgctccaggaggt
cgaacacgactcagcgtcaaaccaaaagaggtcagatctggagcaagcagcaaggagcac
aagaagactgttggctgccagttccggaactctctggctatgttgatggagactctgaat
gcgaccactcctcactatgttcgctgcatcaagcccaacgacctcaagttccccttcacg
tttgaccctaagcgagcagtgcagcagctcagagcctgtggtgttctggagaccatccgc
atctcagctgcaggcttcccatccagatggacctaccaggagttcttcagtcgttaccgg
gttctgatgaagcagaaggacgtcctgtcggacaggaggctgacctgtaggaacgtcctg
gagaaactggtgcaggaccaggacaagtaccagtttggtaagactaagatcttcttcagg
gctggtcaagttgcctacctggagaagctgagggctgataagctgaggaaggcgtgcgtc
cgtatccagaagaccatccgctgctggctggtacgcaagaagtacctccgaaagaagcat
gctgccatcaccatccagagatacacccgcggacaccaggcccgctgtctggttaagtac
atgcgtcagaccctggcagccatcactatccagaagttccagaggatgtgtgtccagagg
aaagtgtacctacagaagcaggctgctgccctggtcatgcagactatcctcagagcgtac
atggcccgacagaaataccaagggttgctgcgtaaccacaaagctgtgttcatccagaaa
cacgtgcgtggctggctggccagacagcggtacaagcgctccctacgagccatcgtctat
ctgcagtgctgcatcaggaggatgaaggccaagaaagagctgaagaagctgaaaatcgag
gcccgctccgttgaacatttcaagaaacttaacgttggcatggagaataagatcatgcag
ctgcagaggaagttagacgaacaggccaaagacaaccgtgtgactagcgagcggctgaac
tgtctggagacgtcccacgcggtggagagtgagaagctgaaggtagaggtgtctaagctg
aaggggatagaagaggaagccaagaacaacgccaaccgtgtcacttctcttctggagcag
ctggagaggctgaggaaggagctgaccaccacccagaaagagaagaagaccattgaggac
tgggctaccaagtacagggatgagatggaaaagatggtagcagagctgaagcagcagaat
ggtctgctgaagaccgagaaagacgacctgaaccgaatgatcaaggaacagagccagcag
atgacagagaaaatgactcgtgcattagcggaggagactcagcagttggagagcgatctg
aacgaggagaggtctcgctaccagaacctcctaacagaacacctgagactggaggaacgc
tacgacgacctcaaggaagaaatcactctctctgtgagcgtgcccaagcccggccacagg
agaacagactccacccacagcagcaacggatcagagtgcacctacaactcagagttcgcc
gaatcagaagaaagttcccgacatggagaagatgtgacccggggcatggacacgtctctg
actctgaagctgcagaagcgcgtaaccgagctggagcaggagaaatcctctctccgcaac
gagctagagaacaaggaggagcagttccagcgggctagagtcagggatgatgaggagcat
aagaaatcacgtggagcagaactggagtacgagtctctcaagcgccaggagctggattcc
gagaacaagaagttgaagcacgacctgaccgccatgaggcagagcctgctgggtaatgca
ggcgctggggcaggggcaccaggaagtccaccctacaaagttctcatggaccaactgaac
tcctcgtgcgaggagctggaggtgcggaaagaggaggtgctgattctacgatctcaactg
gtctcacagaaggaggccatgcagcacaaggatgagaaggagacgatgacagagccagtg
cactatgcagaggatgtccataagatgaaggactctggtgcaatcactcaggcttatcta
ggactcaaagagaccaacagatctcccaggttcttgcgtaaaccactagaagccaatgag
ctcctaaatcggctcagactgttggagggccagatgcagcagcagcggcgtagctatgac
aacgaggtggaggtgttgcgaggggagttacagagtgttaaagaggagaataaccgtcaa
caacagctgctggcccagaacctgcagctcccaccagaggcacgcatagaggctagtcta
cagcatgagatcacacgactcaccaacgaaaacctggagatgctgaggactgaggatcca
acagcatatcgcagcgccaaagtcaacatattacgacggatggttgacctcatggaacag
ctggagaagcaggataaaactatccgtaagcttaagaaacagctgaaggtgttctcgaag
aagattggagaaatgggagctggccatgttgagactatatctccgggtcagatggttgaa
gagacggtccgtccggtgaacattcctcgtcgcgagaaagacttccagggaatgttggag
tacaagaaggaggatgagctgaaactggttaagaacctcatactggagttgaagcctcgt
ggtgtagcggtgaatctgatcccaggcctgccagcctacatcctcttcatgtgtctgagg
catgctgactatgtcaacgatgaccagaaggtcaggacgttgctcacatccaccatcaac
agcatcaagaagatactcaagaaacggggggatgactttgagacggtctccttctggctg
tccaacacctgccgcttcctacactgtctgaaacagtacagcggagatgagtcgtttatg
aagcacaacactcctaagcagaatgatcactgcctgtctaactttgacctggctgagtac
cggcaggtcctcagtgacctggccattcagatctaccagcagctcatcaaatgcatggag
aacatcctacagcccatgattgtctctggtatgttggagcatgagaccatccagggtgtg
tcgggggttaagccgaccggtctgcgtaaacggacatcgagcatcgctgacgagggaacc
tacacgctggaatccatcttacgccagctcagcgctttccactccaccatgtgtcagcac
ggcaccgaccctgaactcatcaaacaggttgtgaagcagcagttctacatcattggagct
gtgactctcaacaatctactgctgcgtaaagacatgtgctcctggagtaaaggcatgcag
atcaggtataacgtgagtcagctggaggagtggctgcgtgacaagtctctgatgctgtgt
ggagccaaggagactctggagcctctgattcaggctgctcagctgctgcaagtcaagaag
aagacggacgaagacgccgaggccatctgctccatgtgcaacagcctgtccacatctcag
attgtgaaggtgttgaacctgtacactccagtcaacgagtttgaagagagggtgtctgtt
accttcatacgaaccatacagactcgtttgcgggaccgctgtgagactcctcagctgttg
atggacactaagatcatctacccagtcaccttccctttcaacccctcctctctggccctg
gagactatccaaataccaggctccctcaacctagccttccttacccgcgtctaa
DBGET
integrated database retrieval system
