Oncorhynchus tshawytscha (Chinook salmon): 112241436
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Entry
112241436 CDS
T05605
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112241436
04082 Neuroactive ligand signaling
112241436
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112241436
Ion channels [BR:
otw04040
]
Ligand-gated channels
GABA-A
112241436
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
112241436
NCBI-ProteinID:
XP_042181994
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Position
LG08:81206498..81238682
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AA seq
442 aa
AA seq
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MGIMILILVTLTCVGRVYGQESYAGENITRILDRLLDGYDNRLRPGSGGMITEVKTDIFV
TSFGPVSDVEMEYTIDMFFRQTWVDERLKYDGAVDILRLNNKMVDKIWTPDTFFRNSRKS
IAHNMTTPNKLFRIMQNGTVLYTMRLTISAECPMSLMDFPMDGHACPLKFGSYAYTSSEI
TFTWRKGLESSVDCPQESISLLQYDLVGQRLSMETFKSNTGFYSVMVVHFLLQRKLGYYL
IQTYIPLIMVVVLSQVAFWINKESVPARTVAGITTVLTMTTLSISARQSLPKVSYATAMD
WFIAVCFAFVASALIEFAAVNYLATLEANRLKKRNARHNKLKALAEASYDEEDDESASSP
PSERGGLKKRYNSISQSEMDTGPSVPIFLQQGSAVPPIPALAGTSPIDQYSRIMFPLAFA
LFNLFYWIIYLGKDTMEQARDD
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcatgattctgattttggtcactttgacctgtgttggccgtgtctatggacaa
gaaagctacgctggtgaaaacatcacccgtattctggaccgactactagatggttatgac
aaccggttgcggccaggatctggaggtatgattacagaggtgaaaacagatatctttgtc
accagctttggaccagtatcagatgtggaaatggagtacaccatcgacatgttcttccga
cagacctgggtggacgagaggctgaagtacgacggcgccgtggacatcctgcgtctcaac
aacaagatggtggataagatctggacacccgacacgttcttcaggaactccaggaagtcc
atcgcacacaatatgaccactcccaacaagctgttccgcatcatgcagaacgggaccgtc
ctctataccatgagactaaccatcagtgcagagtgtcccatgagtctcatggacttccct
atggacggacatgcctgtcctctcaagttcggcagctatgcgtacacgagcagtgagatc
acctttacctggaggaagggtctggaatcttctgtagactgtcctcaggagtctatcagt
ctgctccagtatgacttggtgggacagaggttatccatggagacgttcaagtccaataca
ggtttctactctgtcatggtggttcattttctactacagaggaagctaggctactacctg
attcagacatacatccctctgattatggtggtggtgctgtcgcaagtagccttctggatc
aacaaagagtctgtccctgcacgcactgtggctggcatcaccacggtcctcaccatgaca
accctcagcatcagcgcccgccagtctctgcccaaggtgtcctacgctacagccatggac
tggttcatcgccgtgtgttttgcgtttgtggcgtccgcgctcatcgagttcgccgccgtc
aactacttggccacacttgaggccaacagactgaagaagaggaacgccaggcacaacaaa
ctgaaggccctggctgaagcaagttatgatgaggaggatgatgagagtgcttcatctccc
ccctcagagagagggggcctgaagaagaggtataactccatatcccagagtgagatggac
actggcccctcggtgcccatcttcctgcaacagggttcagctgtgccccccatcccagca
ctggctggcaccagcccaatagaccagtactcccgcatcatgttccccctggccttcgca
ctcttcaacctcttctactggatcatatacctgggcaaggacaccatggaacaggccaga
gatgattga
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