Oncorhynchus tshawytscha (Chinook salmon): 112241444
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Entry
112241444 CDS
T05605
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112241444
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112241444
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
112241444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
FYVE_2
IBR
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
112241444
NCBI-ProteinID:
XP_042160254
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All DBs
Position
LG22:complement(43407839..43569706)
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AA seq
1064 aa
AA seq
DB search
MQLNRPKSALVTSFSPPMVPETAASRSTSTVSFSRQFKTMRFSYHISSGMPSPQPPLRGI
RPSSSSPRLMTKSLSLDPGAHGACLGAHADDSDTQTPRLSSDPGSLTSGSLGLHPSMPLL
YPAGHGCNGGDNGSGTPQEVPSTALKRRPPLPGPKPQVPPKPPHLQQSAGAPRPCPRVPD
KPLPPPPPCRPLPADPRGGGPCRLPTLPRAEGRSSPTACVLSLIEKFEREQIIVVPDIMG
GGLCNPRVPETGPGGGPFSPPVSELTLGCLHVACPPGSSQELDDLPQGLAVLAGVVLGEK
AGETDNMEEDNDKEHELGALCSASDKRLSMESGYSASEKLTDAVAIRGQAEPESQSGIPS
DNLSLLQPQADGKLANRDSGIDSISSPSHSEELCFAGDEDRVIFPCSPALTLPRLSSSSS
CSYAEGPGGEGASAEGGGDSEGDSDLEEGSGDETIELINPMMDLQPLALALPKTDRQDST
ELSVQQRVFNIANELLHTEKAYVSRLYLLDQVFCSSLLEEARSRSSFPLDVVMGIFSNIC
SIYCFHQQFLLPALEKRMAEWDVNPRIGDILQKLAPFLKMYGEYVKNFDRAMELVNTWME
RSSQFKAIVHHIQREERCGNLTLQHHMLEPVQRIPRYELLLKDYLHRLPGDHDDFKDAQK
SLELIATAAEHSNTAIRKMERMRKLLKVYELLGGEEDIVNPTNELIKEGHILKLSAKNGT
SQDRYLILFNDRLLYCVPKLRLIGQKFGVRARIDVDGMELKESSSINVPRTFLVSGKQRS
LELQARTEEEKRDWIQAIQATIQRHEQTLATFHHLNCSLRDEDYTPPNSPNCNELGKRAP
TPIREKEVTLCMKCQEPFNSITKRRHHCKACGHVVCGKCSEFRARLLYDNNRANRVCIAC
YTTLVGVPPSPASLTSSAYRRRSILEKQASVAAENSVMCSFLHHMEKGAGRGWQKAWFVI
PENEPLVLYIYGAPQDVKAQRSVPLIGFEVSLPESCDRMERRFAFKISQSHLTLYFSADG
EELQRRWTEVLSRAGRGEELQAHGSIIETLEEEGEETATSGENT
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgaaccggccgaagagcgctttagtgacgagcttcagcccgccgatggtcccg
gagacagcagccagtaggagtaccagtacggtttccttctccagacagttcaaaacaatg
cgcttctcctaccacatcagcagcggcatgccaagtccacaaccaccgctgcgcgggata
cgcccgtcctcttccagtcctcggctgatgactaagagcctgtctctggatcctggtgct
cacggtgcctgcctcggggcccatgccgatgactcagacacccagacccctcgcctcagc
tcagaccccggatccctaacctccgggtcccttggtctgcacccatccatgcccctgctg
tacccagctggacacggctgtaacggaggagacaacgggagtggaactcctcaggaagtg
ccctccaccgccctcaagagacgccctcctctacctgggcctaaaccacaagtgccccca
aagcctcctcacctgcagcagagtgctggtgctcctaggccctgcccccgcgtcccggac
aagcccctcccacctcccccaccctgcagacctctgcctgcagaccccagagggggagga
ccctgccgactgccgacactcccccgcgccgagggacgctcctcccccaccgcctgtgtg
ctctccctcattgagaagtttgagagggagcagatcattgtggtgcctgatatcatggga
gggggtctctgcaaccccagggtccctgagacaggaccaggtgggggccccttctctccc
ccagtctcagagctcactctcggctgtctccacgtggcctgccctcctggttcctctcaa
gagctggatgacctacctcaggggctggctgtgttggctggcgtggtgctgggagagaaa
gcaggagagacagacaacatggaggaggataatgataaagaacacgaactaggagcattg
tgctctgcctctgacaagcgcctgtccatggagtccggttatagcgcctcagagaaactc
acagacgccgtggcgataagggggcaggcggagccagaaagccaatcagggatcccctct
gacaacttgtccctcctccagccgcaagcggacggcaaactggccaatcgagactctggc
atcgacagcatcagctctccgtcccacagtgaggagctgtgttttgccggcgacgaggac
cgggtcatcttcccctgtagtcccgccctcacgctgccacgcctctctagctcctcctcc
tgcagctatgcggagggcccggggggagagggggcgtcggctgagggtgggggggattcg
gagggggacagtgacttggaggagggaagcggggatgagaccattgagctcatcaacccc
atgatggatctccaacctctggcactcgccctccctaaaacagacagacaggactctaca
gagctgtcggtgcagcagcgtgtgttcaacatagcaaatgagctcctccacacagagaag
gcctacgtgtctcggctgtacctcctggaccaggtgttctgctcctccctcctagaggag
gcgcgctcccgctcttccttccctctagacgtggtcatgggtatcttctccaacatctgc
tctatatactgtttccaccagcagttcctgctccccgccctggagaaacgcatggcagaa
tgggatgtgaacccgcgcatcggggacatcctgcagaagctagcccccttcttgaagatg
tacggagagtacgtgaagaactttgaccgggccatggagctggtcaacacctggatggag
aggtcgtcccagttcaaagccatcgtccaccacatccagagagaggagcgctgtggtaac
ctgaccctacagcaccacatgttggagccggttcagaggatccctcgctacgagctgctg
ctgaaagactacctgcaccgtctccctggcgaccatgatgactttaaggatgcacagaaa
tctctggagttgatcgccacagcggcagagcactccaacacagccatcagaaagatggag
cgtatgcgtaaactgctgaaggtgtatgagttgctgggaggagaggaggacatcgttaac
cctactaacgaactcatcaaggagggacacatcctcaaactgtcggctaagaacggcacc
tcacaggacagatacctcatcctgttcaatgataggttattgtactgcgtccctaaactg
aggttgattggtcagaagtttggggtgagggccaggattgatgtggatgggatggagctg
aaggagagcagcagtattaacgttcccaggaccttcctggtgtctgggaaacagcgctca
ctagagctccaggccaggactgaagaagagaagagagattggatccaagctatccaggcc
actatccaaagacatgaacagacgcttgccacgttccaccatctcaactgttctctccga
gatgaggactacactcctcccaactcacctaactgtaatgagctggggaagcgtgccccc
actccgatccgtgagaaggaggtgactctgtgtatgaagtgccaggagccgttcaactcc
atcaccaagagacgccaccactgcaaggcctgtggacacgtggtgtgtggaaagtgttca
gagttcagggcccgtctgctctacgacaacaacagggctaacagggtgtgcatcgcctgc
tacaccaccctagtgggggttcccccctcccccgccagtctgacaagcagcgcatacaga
agacggtcaatattagagaaacaggcgtcggtggcagcagagaacagtgtgatgtgtagc
ttcctccaccacatggagaagggagcaggcagaggctggcagaaagcctggtttgtcatc
ccagagaatgaaccactggtgctgtacatatacggtgctcctcaggatgtgaaagcccag
cgctctgtccctctgattggcttcgaggtctcccttcctgagtcatgtgaccgcatggaa
cgccgctttgccttcaaaatcagccaatcacaccttacactctacttcagcgccgacggg
gaggagctacagcgccgctggacagaggtcctatcacgtgcagggagaggggaggagcta
caggctcacggttcaatcatagagaccctagaggaggaaggggaggagactgcaacctcg
ggagaaaatacgtga
DBGET
integrated database retrieval system
