Oncorhynchus tshawytscha (Chinook salmon): 112241463
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Entry
112241463 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: cysteine protease ATG4D-like
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04136
Autophagy - other
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112241463
04136 Autophagy - other
112241463
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112241463
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112241463
03029 Mitochondrial biogenesis [BR:
otw03029
]
112241463
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
112241463
Membrane trafficking [BR:
otw04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
112241463
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112241463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
NHS
Motif
Other DBs
NCBI-GeneID:
112241463
NCBI-ProteinID:
XP_042160418
LinkDB
All DBs
Position
LG02:complement(73361979..73374443)
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AA seq
527 aa
AA seq
DB search
MNSVSPSAVQYVGGVGVVCQDDTLQREETKRPQQPQLVDPGGGSGFGKRQGTDVGGGGTR
DATTAGEPDEVDKLKTKLMSAWNNVKYGWSVKSKTTFNKSSPVTVMGHSYLLNSEDEVER
FRRAFVSRLWLTYRREFPQLEGSTLTTDCGWGCMLRSGQMLLAQGLLLHLLPRDWSWPDA
QQFADVDFEALRPRSPSRAGGVPIPSFGYSSSSRTPTTPQKTSMPGGTALNHTQKKRPES
GRDRQAEPLHRRVVAWFGDEPPAPFGVHQLVELGKSSGKKAGDWYGPSVVAHILRKAVAK
TSEVHNLAVYVAQDCTVYKKDVVHLCDQSLNQSISDPEPSGPGWKSVIILVPVRLGGDSL
NPSYIKCVRNILRLECCIGIIGGKPKHSLFFIGCQDEQLLYLDPHYCQGVVDVTQDNFPL
ESFHCSSPRKMPFSRMDPSCTIGFYAKNKKDFESLCSAVCVALSSPEEKYPIFTFVEGQA
QDYGLVGHSSSYPHYDTSPTPGPAHMLPQGKLSRSNNIGSSDDFVFL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtgtctcccagtgcagttcagtatgtggggggagtaggagtggtgtgtcag
gatgacaccctccagagagaggagaccaagaggcctcagcagccacagctggtggaccct
ggtggaggaagtggctttgggaagcggcagggtactgatgtcggtgggggtggaaccaga
gatgccaccaccgctggagagccagacgaggtggacaaactcaagaccaagctgatgtcg
gcgtggaataatgtcaaatacggctggtcagtcaagtcgaagaccacattcaacaagagc
tctccggtgactgtaatgggccactcctatctgctcaatagtgaagacgaggtggagcgg
ttcaggcgggcgttcgtgtctcggctgtggctgacctaccgtagggagttcccccagctg
gagggctccaccttgactacagactgtggctggggctgcatgctgcggagtggacagatg
ctgctggcccaaggcctactgctacatctgctgccacgagactggtcgtggccagacgcc
cagcagttcgctgatgtagactttgaggctctgagaccccgctccccgtcccgtgctggt
ggcgtacccatcccctccttcggctactcctcctcctcgcggacccccaccacgccccag
aagacctccatgccagggggcacggctctcaaccatacccagaagaagaggcccgagtcg
ggcagggacaggcaggctgagcccctccaccggagggttgtggcctggtttggggatgag
cccccagccccgtttggggtgcaccagctggtagaattggggaagagctcagggaagaag
gcgggggactggtacggcccctcagtggtggcacacatactacgaaaagcagttgccaag
acttctgaggttcacaacctggctgtatatgtagcgcaggactgtaccgtgtacaaaaag
gatgtggtgcatctgtgtgaccagtcgttgaaccagagtatatcagatcctgagcccagt
ggtccaggctggaagtctgtcatcatactggttccagtccgactaggaggagactctctc
aacccctcctacatcaagtgtgtcaggaacattctcaggttagaatgctgtatcgggatc
attggcggcaaacccaagcattcgctgttctttatcggctgccaagacgagcagctgctg
tatctggaccctcactactgtcagggcgtggtggatgtcactcaagacaacttcccactg
gagtcgttccactgtagctcgcccaggaagatgccctttagtcgcatggaccccagctgt
actataggcttctacgccaagaacaagaaggactttgagtctctatgttctgccgtctgt
gtggccctatcgtcgcccgaagagaagtaccccatctttaccttcgtggagggccaggcc
caggactatggactggtgggccacagctcctcctatcctcactatgacacctcccccacc
cctggccccgcccacatgctgccccaaggcaagctcagcaggagcaacaacataggcagc
tctgacgactttgtcttcttgtga
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