KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112241534
Entry
112241534         CDS       T05605                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 4C-like
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:otw03036]
    112241534
Enzymes [BR:otw01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     112241534
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     112241534
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    112241534
SSDB
Motif
Pfam: zf-HC5HC2H_2 JmjC Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Rad9_Rad53_bind Tudor_5
Other DBs
NCBI-GeneID: 112241534
NCBI-ProteinID: XP_042172010
LinkDB
Position
Unknown
AA seq 1825 aa
MAGAEVYGPVNPSCKIMTFRPTVEEFRDFNRYLAHMEAQGAHRAGLAKVIPPKGWRPRCS
YDDIDDLVIHAPIQQMVAGQSGLFTQFNIQKKPLSVKEFRRLANSDKYCTPRYLNYEDLE
RKYWKNLTFVSPIYGADVPGSLYDEGIEEWNIGHLNSILDVIEEDCGVSIQGVNTPYLYF
GMWKTSFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLATGFFPNGFKGCEAFL
RHKMTLISPSILKKYSIPFDKLTQEAGEFMITFPYTHGYHAGFKLQCRDSTSQCPTHXNK
VATQCTCSKDMVKISMDPFVKWFQPDRYAVWKLGKDCCPLDHTRATPATTPELQNWLQRS
RVKTPVNSSLSHPRTRSKRLRTSEEPVALEGCSVLGRRRGLGGTLGPKVRRGCRAGEDED
DEEEGEDQTENTLRLPGPCRQMCVVKVNRMEVESDRLAFPCPPEPLRPLSFPSPSSDFSS
RPSPSLTPVSVDTTEQGTGAGTHPSPHLHPTNPPQNPSGPEFAEVIKGPHQTSEAAPTPT
RSERREIPEPLGQVPEDCSVDVHPSPDPLRTRLPSPRTVHPTGAQGCTDSACGPGAFQSS
SSCVEKSSLNLTSTLAPGTQYKVDTCQGTAVNTTTTTTTTTTTHSSHTSESKTPALYNDI
DTNTDSGSRGRVISGSGSGPANLFRCSEKNRTPVENRSSLPMCTTHNHVPIQNPSLLPMC
SLRDRCPPLLQRNNGVDMPFLTPELSGETRFYPPLPPVLTQEMPSLTLAVSGGHAEIKGQ
RSSSSSSTGRHGGALTLPDLPGSHPVLAPVLRREIPTTLSPGTETLTDEVCEVELASKKS
EEEDFRPLAPYRDWRLGSAEDHHRPELDLQVAAYVANATSNARPKMAASDHKMAPSRHSG
PTEDHHHRPELEVQVAAYAASATSDAQPEMAASLHKMAASLHKMAADASHLEALPIQTMS
EAVLTTENHCSRTSAETHASNNNHMLCDVTLLPTQQIQKHGSSTVTTAVSMDSDSEGSSQ
RDDVFRDSSTKGLYLASTSLTSKDKLAHSSELSELNNHLATVQHQHNHDQTPHSNMDAVC
SSRNVESICSSQNVDSICISRNVDSVCSSQNLYLEPKPFSDGIWKNLNSQSPAVLIESLH
HPELPADYTHDALPYTMWTEPQCKEVTDLDHETETDDQDPEGHGDGPLTWAQLESTSLGS
AGVGEPLGLCGDFELQRGEVEAAEALALCRELGVEREAEGAPESPLEERPGEGEVSDMEE
GDSEDEGQSSTREESSSESSEGEAEEEEEEGEEDYDNDLSDFECGDSGLEPGEVCTYPAA
PLAKRTSKSWRRPLRKPTARAVPSTVKQQAVSDDEPPDASLMEGEEQEAEPWAKPLLFLW
QNRKCYFTAEREYNANAAKMLPHCAVCTLFMPYYQPEDRADRLKPVPSSPPPSPTTSRTR
GGPGGLRRSKPLLPEICFSYREQTCPPTPTNALLQEDGTSPLITCQGCCLQVHASCYGVA
ADDVSEDWSCDRCADGTLTAECCLCNLRGGALKKTTDDKWAHVMCAVALSEVWFRDEVRR
SPIDISRIPMQRYKLKCIYCRKRCVRRGQGGGGACIQCSCGRCPTSFHVTCAHAAGVTME
PDEWPYVVSITCHRHQSRSSSAQRAAFQKDIVLGQTVISKHKNLRYYSSKVTQVTSQTFY
EVMFDDGSFSNDTYPEDIVSRDCACLGPPEVGXAVQVKWPDGLFYGAKYQGSNTSHMYQV
EFEDGSQVVAKREDVYTLDEDLPKKVKGRLSTASSMRFQDAFFTTQGERKRQRTPNSRFQ
KDYVALPGLLTASQSTWEPRSPKGK
NT seq 5478 nt   +upstreamnt  +downstreamnt
atggcaggggcggaggtctacggccccgttaacccctcctgcaagatcatgaccttcagg
cccaccgtggaggagttcagagacttcaaccggtacctggcccacatggaggcccagggg
gcgcaccgtgctggcctcgccaaggtgattcctcctaagggctggcgtcctcggtgtagc
tatgatgatattgatgacctggtgatccacgctcctatccagcagatggttgctggccag
tcaggcctgttcactcagttcaacatccagaagaaaccgctcagcgttaaggagttcaga
cgcctcgccaacagtgacaaatattgtactccccgctacctgaactatgaggacctggag
aggaagtactggaagaacctgaccttcgtatctcccatatatggagctgacgtccccggg
agcctctatgacgagggtatagaggagtggaacatcggccacctcaactccatcctggat
gtgattgaagaggactgtggtgtttctatccagggggtgaacacaccctacctgtacttc
ggcatgtggaagaccagcttctcctggcacactgaagacatggacctttatagcatcaac
tacctgcactttggagagcccaagtcctggtatgccatcccccctgagcatgggaagaga
ctggagagactggctacaggtttcttccccaacgggtttaaaggatgtgaggcttttctc
cgtcacaagatgaccctgatctccccttctatcctgaagaagtacagcatccccttcgac
aagctcacccaggaggcaggagagtttatgattaccttcccctacacacatggttaccac
gctggcttcaagcttcagtgccgagattctacttcccagtgtccgacacacnntaacaag
gtggccactcagtgtacatgcagtaaagacatggtgaagatcagcatggatccctttgtg
aagtggttccaaccggaccgctatgctgtgtggaagcttgggaaagactgctgtcctctg
gaccacacccgagccacgcccgccaccaccccagaactgcagaactggcttcagcgcagc
cgggtcaagaccccagtgaacagcagcctctcacacccacggaccagatccaagcgcctg
aggaccagcgaggagcctgtcgccttggaagggtgctctgtcctgggaaggaggaggggc
ctcggaggcaccctgggtcctaaggtccggagaggctgcagggctggggaggatgaggac
gatgaggaggaaggagaggatcagactgagaatacactccggctccctggtccttgtcgg
cagatgtgtgtggtgaaagtcaacagaatggaagtggagagtgaccggttggccttcccc
tgtcctcctgaacctctgcgccccttgtctttcccctcaccctcttccgacttctcttct
cgcccttctccctcgctgacccctgtctcagtggacaccacagaacaagggacaggggcg
gggactcacccctcaccccatctgcatcccactaaccccccacagaacccctcagggcca
gagttcgcagaggtcattaaaggaccccatcagacgtccgaggctgccccaacacctacc
cgatcagaaagaagagaaatcccggagccactgggacaggtccccgaggactgctctgtg
gatgtccacccctctccagaccccttacggaccaggttaccttcccccagaacggtgcac
ccgactggggctcaggggtgtacggactcggcctgtggccctggagcttttcagtccagt
tcctcttgcgtagagaagtcgtctttaaacctaacctcaaccctagcccccggcactcag
tataaagtggatacgtgtcaaggtactgcggttaatactactactactactactactact
actactacacacagcagtcacacctctgaaagcaaaacgccagcactttacaatgacatt
gacacgaatactgactccgggtccagaggacgtgttatttctggttctggttctggtcca
gctaacttgttcaggtgtagtgaaaaaaaccgcactcccgttgaaaaccgttcctctctc
cctatgtgtactacacacaaccacgtccccatacaaaacccttcccttcttcctatgtgt
agtttacgagaccgttgccctcctctcctccagaggaacaacggggtcgacatgcccttc
ctcactccagaactgtctggagagacgaggttctacccgcctctgccgcccgttctcacc
caggagatgccctccctcacactcgccgtcagcggaggtcacgccgagatcaaaggtcag
cggtcgtcgtcgtcgtcctcgactggccgacacggtggtgctctaaccttaccggatttg
ccgggcagtcacccggtcctcgcccccgtgctccgacgcgagatacccacgaccctctcg
ccaggaacggaaacgttaacggacgaggtgtgcgaggtagagttggcgtcaaagaagtcg
gaggaagaggattttcgaccgttagcgccttacagagactggcgcttgggttctgctgaa
gaccaccatagaccagagctggatttacaggtagcggcttacgtggctaatgcaactagt
aatgctcggcccaaaatggccgcctctgatcacaaaatggccccctctcggcactctggt
cctactgaagaccaccaccataggccagagctggaggtacaggtagcagcttacgcggct
agtgcaaccagcgacgctcaacccgaaatggccgcctctctgcacaaaatggccgcctct
ctgcacaaaatggccgccgacgcttcccatctagaagcactaccaatccaaacaatgtct
gaggccgtgctgaccaccgagaaccactgtagtcgaacctccgcggagacccatgctagc
aataacaaccacatgctctgtgacgttacactactgccaacgcagcaaatccagaaacac
gggtcctcgacggtaactacagcagtatccatggactccgactcagaaggatcctctcaa
agagacgatgtatttagagactccagtactaagggtttatatctcgctagcaccagtttg
acttctaaagataagttggcccactcttctgagctgagtgaattaaataaccatttagca
acagtacaacaccaacacaaccatgaccaaactccacactcaaacatggatgccgtttgt
agttcacgaaatgtggaatccatttgtagttcccaaaatgtggattccatttgtatttct
cgaaacgtggactctgtttgtagttcccaaaacctctacctggagcccaaacctttctca
gacggcatctggaagaacctcaactcccagagtcctgcggtgctcatcgagagcctccac
cacccggagctccccgccgactatacccacgatgcactaccttacaccatgtggaccgag
ccgcagtgcaaagaggtcacagacctcgatcacgaaactgaaacggacgaccaggaccca
gagggacatggggacgggcctctcacctgggcccagctggagtccacctctctggggtcg
gccggtgttggggagcccctgggcctctgtggagactttgagctccagagaggggaggtg
gaggcagcggaagccctggctctgtgcagggaactgggggtggagagggaggccgagggg
gctcccgaatcgcccttggaggagagaccgggggaaggagaggtgtctgatatggaagag
ggagattcggaggacgaggggcagagcagcacgagggaggagagtagtagtgagtcatcg
gaaggagaggctgaagaagaggaggaagaaggggaggaagactatgataatgatttgagt
gactttgagtgtggcgactcggggctggaacctggagaggtttgcacttaccctgctgct
ccgctggcgaagagaaccagtaagagctggcgtcgccctctgaggaagcccaccgcccgg
gccgtgccctccactgtcaaacaacaggctgtcagcgacgacgaacccccggatgcgtct
ttgatggagggggaggagcaggaggctgagccatgggctaagcccctcctcttcctgtgg
cagaacaggaagtgttacttcacggcggagagagagtacaacgctaacgcagccaagatg
ttgccgcactgcgctgtctgcacactgttcatgccctactaccagcctgaggacagagct
gaccgcctcaagcccgtcccctcctcccctcccccgtctcccaccacctccaggactaga
ggaggaccagggggtctgaggaggagcaagcccctgctaccagagatctgtttcagctac
agggagcagacgtgcccccccacccccaccaacgccctgctgcaggaggacggcaccagc
ccgctgatcacctgtcaggggtgctgtctacaggttcacgctagttgctatggcgttgcc
gctgatgatgtcagcgaggactggtcgtgtgaccgctgtgcggacggaaccttgacggct
gagtgttgtctgtgtaatctgagaggaggagctctgaagaaaactacagatgacaagtgg
gcccacgtgatgtgtgcagtagctctgtcagaggtctggttcagggatgaagtcaggagg
agtcccattgatatcagcaggatacccatgcagagatacaaactgaagtgtatctactgc
cgtaagcggtgtgtgaggcgtggccagggcgggggaggggcatgtatccagtgttcgtgt
ggtcgatgccccacctccttccacgttacctgtgcccacgccgccggggtcaccatggag
ccggacgagtggccttacgtggtgtcaatcacctgccacaggcaccaatcacggagctcg
tctgctcagcgtgcagcgtttcagaaggacatcgtcctgggtcagaccgtcatctccaaa
cacaagaacctgcggtactacagttcaaaggtcacccaggtgacctcccagaccttctat
gaggtcatgtttgatgacggatccttcagcaacgacacctacccagaggacatagtgagc
cgggactgtgcctgtcttggtcctccagaagtagggnaggctgtccaggtgaagtggcct
gatggactcttctatggagccaaataccagggatccaacacctcgcatatgtaccaggtg
gagtttgaggatggttcccaggtggtagctaagcgagaggatgtctatactctggatgaa
gaccttcccaaaaaggtgaaagggcgactctcaacggcatccagcatgcgtttccaggac
gccttcttcacgacccagggagagaggaagagacagagaacgcccaactcccgtttccag
aaagactatgtggccctcccaggcctccttaccgccagccagagcacatgggaaccccgc
agccctaaagggaaatga

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