Oncorhynchus tshawytscha (Chinook salmon): 112241639
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Entry
112241639 CDS
T05605
Name
(RefSeq) synaptic vesicle glycoprotein 2B-like
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112241639
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112241639
Transporters [BR:
otw02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
112241639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LD_SV2
Sugar_tr
MFS_1
Pentapeptide_3
Pentapeptide_4
MFS_2
EF_assoc_2
Motif
Other DBs
NCBI-GeneID:
112241639
NCBI-ProteinID:
XP_042172579
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MDDHWQNNVNQQGTEIPTYGEGGGQEYPYQADFPQQEGGGDEDARSDATEGHDEDAEAMY
EGEYQGIPHPDEIKAAQRAARAEARKKARLAAAMPDEEDLAEQYENIMEDCGHGRFQWTL
FIVLGMALMADGVDGFVVGFVLPSAEKDMCISNANKGMLGLLVYVSMMVGAFVWGSLADK
MGRRKCLIYCLAIDCVFSFLSCFAQGYGFFLFFRFCSGFGIGGTVPIVYTYFAEFLQMDK
RGEHLSWLCMFWMFGGLYASFTAWGIIPHYGWGISLGTQYQIHTWRVFILVCMFPAIIAL
VGLVFMPESPRFFLENGRHDEAWMILRQVHDTNWKAKGEPERVFTVSTNITTPKTQEDEF
IEIQSDTGTSFQRWTVRHINLLKQVMQNVMSLAAPDLRLQGLFLAIVWFTMAFSYHGLSV
WFPDMIKYMQYEEYESKVKLFHRERVERFHFNFSLVNQIHKEGEYVHDKFMDIEIKSVKF
EDSLFENCYFEDVRSTNTYFENCTIKNTVFYNTDLWEDSKFIDCRMENATFLHPKKGCHL
NFQEENDIVIYMVSFLGSLATLPGNILSALFMDKIGRIKIIGGSMLISAVCTFLLLLSFS
QGAVILFQCLFYATSVAAWNGLEVITVEIYPSAKRCTAFGVLNGTCKLAAIIGSIIFAKF
IGITKIIPIFLAFAALACGGLLATKLPDTREKILE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccattggcagaacaatgtgaaccagcagggcactgagatccccacctacggg
gagggaggcggccaggagtacccctaccaggctgacttcccccagcaggagggtgggggg
gacgaggatgctaggagtgatgccacggaaggtcacgatgaggatgcagaggcgatgtac
gaaggagagtaccaggggatcccccaccctgacgagatcaaggcggcccagcgggcggcc
agggccgaggccaggaagaaggccaggctggcagcagcgatgccggatgaggaggacctg
gcagaacagtacgagaacatcatggaggactgtgggcacggtcgtttccagtggaccctg
tttatcgtgctgggcatggcgctgatggcggatggcgtagacggatttgtggtgggcttt
gtgttgcctagcgccgagaaggacatgtgcatatccaacgccaacaagggcatgctgggt
ctgttggtgtatgtgtcgatgatggtgggggctttcgtgtggggcagcctggcggataag
atgggccgtaggaaatgtctgatctactgtctggccatcgactgtgtcttcagcttcctg
tcctgcttcgctcagggatacggattcttcctcttcttccggttctgctccggcttcggg
atcggagggactgtccccatcgtgtacacctacttcgcagagttcctccagatggataag
agaggggagcaccttagctggctgtgtatgttctggatgttcggtggactctacgcctcc
ttcaccgcctggggaatcatccctcactacggctggggcattagcctggggacacagtac
cagatccacacctggagagtattcattctggtgtgtatgtttccagccatcattgccctc
gttggactggtcttcatgccagagagtccacgcttcttcctggagaatgggagacatgac
gaggcctggatgattctgagacaggtccatgataccaactggaaggccaagggagaacct
gagagggtattcactgtgagtaccaacatcacgactcctaagacccaggaggatgagttc
attgagatacagagtgacactggaacatccttccagcgctggactgttagacacatcaac
ctcctcaaacaggtgatgcagaacgtgatgtccctggcagcaccagacctcagactgcag
ggtctgttcctggctatcgtctggttcaccatggccttcagctaccacggactgtcggtg
tggttccctgacatgatcaagtacatgcagtatgaggagtacgagtccaaggtgaaactc
ttccatcgagaacgagtggagcgattccacttcaacttctccctggtcaaccagatccac
aaagagggagaatatgtccatgacaagttcatggatatagagatcaagtctgtgaagttt
gaagattccctgtttgagaactgttactttgaggacgtcaggtcgaccaacacgtacttt
gagaactgcaccatcaagaacacggtcttctataacacagacctttgggaagactctaag
tttatagactgtcggatggaaaatgccacgtttctccatccgaagaaaggctgccatctg
aacttccaggaggagaacgacatcgtcatctacatggtcagcttcctggggagtctagcg
acactgccaggcaacatcctgtcagccctcttcatggacaagataggaaggatcaaaatt
ataggtggttctatgctgatatcagcagtttgtacgttcctcctgctcctcagcttcagt
cagggggcagttatattatttcagtgccttttctacgctaccagcgtcgcggcctggaac
ggactggaggttatcacagtagaaatctacccttctgctaaaagatgcacagcgtttgga
gtgctgaacggtacctgtaagctggcagccattattggcagcatcatctttgccaagttc
atcggcatcacaaagatcatccccattttcctggcgttcgcagcgctggcctgtggaggt
ctgctggccaccaaactgcccgacacacgggagaagatcctggagtga
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