Oncorhynchus tshawytscha (Chinook salmon): 112241717
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Entry
112241717 CDS
T05605
Name
(RefSeq) calpain-3-like
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112241717
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112241717
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
112241717
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C2: calpain family
112241717
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Alpha_adaptin_C
Motif
Other DBs
NCBI-GeneID:
112241717
NCBI-ProteinID:
XP_042186308
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Position
LG11:54444647..54497460
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AA seq
713 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLSKPLRFSGQDFTALKQECLTKKCLFEDDTFPASV
ESLGYKELGHKSNKVKNIVWKRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQEQSFSEGYGGIFHFQFWRYGDWVDVVIDDRIPTFNSQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SMMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVEECKQSQHKEPKVRLVRLRNPWGQVE
WNGPWSDNSKEWVSLSKGEKDKLQHQSAEDGEFWMAFDDFKKNYTKIEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDNEVACSFVIAL
MQKNRRKERKMGANLFTIGFAIYEVPKEMHGNKQHMQKDFFLFNSSKARCKSYINLREVT
QRFRLSPGEYVIIPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHPVPAPANAGEES
EEDQQFRSLFQQIAGDEMEITANELKNVLNSIVSKHKDLNTEGFSLECCRSMISLMDMDG
TGRLNLQEFRHLWNKIKQWQGIFQHYNSDQASSINSYEMRNAVNDAGFRLNNQLYDIITM
RYANESMNIDFDSFISCLVRLEAMFRAFQAFDQDGDGTIRLSVLEWLQLTMYA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccctatacaccgtccggcttcttctgtgaccggctgatccgggagagagagagaaga
gatggagaaggatccctcagcaagcccctgcgcttcagcggacaggacttcaccgcactg
aaacaagagtgcctcaccaagaagtgcctgtttgaggatgacaccttcccagcctccgtg
gagtctctggggtacaaggagctgggacacaagtccaacaaggtcaagaacatcgtctgg
aagagacccaaggagatctgtgagaaccctcagttcattgtgggcggagccagcaggaca
gacatttgccagggagatcttggtgactgctggctgctggctgctatagcctgtctgact
ctgaatgagaagcttctctaccgggtcgttcctcaggaacagagcttctctgagggatat
ggaggaatcttccacttccagttctggcgctatggcgactgggttgacgttgttattgac
gaccgcatccccaccttcaacagccagctggtgttcaccaagtctgccgagagaaatgaa
ttctggagtgccttgctggagaaggcctacgccaagcttcacggttcctacgaggccctg
aagggcggtaacactacggaggccatggaagacttcaccgggggcgtgacagagttctat
gagatgaaggaggcgcccaaggagttgtacaagatcatgaagaaggccctggagagaggc
tctatgatgggctgctctatcgactccctggttcctgctcgttttgagacccgcactgtg
actggccttgtaaagggccacgcctactctgtgactgccgttgaggagtgtaagcagtcc
cagcacaaggagcctaaggtgcgtctggtgcgcctcaggaacccctggggacaggtggaa
tggaatgggccctggagtgacaactctaaggagtgggtgtctctgtctaagggagagaag
gacaagctccagcatcaaagtgctgaggacggggagttctggatggcctttgatgacttc
aagaagaactacactaagattgagatctgcaacctgacccctgatgccctggaggatgat
aagatccacaagtggacggtgtctgtgaacgagggtcgctgggtcagaggctgctccgcc
ggaggctgtagaaactacccagatactttctggaccaaccctcagtaccgtctgcgtctc
ttggaggaggatgatgacccagaagacaacgaggtggcgtgttccttcgtgatcgctctg
atgcagaagaacagacggaaagagaggaagatgggagccaatctcttcaccatcggattt
gccatctacgaggtgccgaaggagatgcacggaaacaagcagcacatgcagaaggacttc
ttcctgttcaactcatccaaggctcgctgcaagtcctacatcaacctgagggaggtgacc
cagcgcttccgtctgagccccggggagtacgtgatcatcccgtctacctacgagcctcac
caggagggagagttcatcctcagagtcttctccgaaaagaggaacacctcagaggagata
gagaacaggatcgaggctgatcatccagtgccggccccagccaatgcgggggaggagagt
gaggaggaccagcagttccggagcctctttcagcagatagccggggatgaaatggaaata
accgccaacgagctgaagaatgtcctcaacagcatcgtctccaaacataaggacctgaac
acagagggttttagcctggagtgctgcaggagcatgatctctctcatggacatggacggg
acgggcagactcaacctgcaggagttcagacatctctggaacaagatcaagcagtggcag
ggaattttccaacactataactcggaccaggctagtagcatcaacagctacgaaatgaga
aatgctgtcaacgatgcaggcttccgtctcaacaaccagctgtatgacatcatcaccatg
cgttacgccaacgagagcatgaacatcgactttgacagcttcatcagctgtctggtccgg
ctcgaagccatgttcagggcgttccaggccttcgaccaggatggagacggtacgatcaga
ctcagtgtcttggagtggctccagctgaccatgtatgcctag
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