Oncorhynchus tshawytscha (Chinook salmon): 112241744
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Entry
112241744 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: FH1/FH2 domain-containing protein 3
KO
K23939
FH1/FH2 domain-containing protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112241744
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
112241744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
FH3_FHOD1-3
Formin_GBD_N
KorB
Motif
Other DBs
NCBI-GeneID:
112241744
NCBI-ProteinID:
XP_042151004
LinkDB
All DBs
Position
LG13:complement(4916745..5102603)
Genome browser
AA seq
1452 aa
AA seq
DB search
MATFVCRVQFLDDTDPFNSTNFPEPTRPPHYTFREDIPLINQIAGVHRLLRAPHKLDDCA
LQLSHNGTYLDLESSLSEQRDELEGFQEDIAGTRGKKHSVVLRTQLTVRVHACIEKLYNS
NGRDLRRALFSLKQIFQDDKDLVHEFVMAEGLTCLIKVGAEADQNYQNYILRALGQIMLY
VDGMNGVICHIETVQWLYALIGSKFRLVVKTALKLLLVFVEYSESNASLLIEAVTTVDTK
RGCKQWSNAMEILDEKDGVDTELLVYGMTLINKTLSALPDQDSFYDMVDGLEDQRMEAVA
KRFLGRRGTDLDLMEQLNIYEATLRHEDGDDESNPPTGLSGLKDRRRASFGDKRRGLERR
RSRRASLGRSGNASPCSPSTQHSGFQPFKGQGGEDMSKRTGVQSPVTPANKSSLGGLLSS
SYRQHQESLSAERERRRAEREERLQRIEREERNKHSRDYVDKMEEARMARDERYKHVERL
AAEEFERDRVPRSRPDLSLTFNPVEAWAPTSSRSTTPSSLASQDEEQNQEPEEPDTETDL
EPEETETPVTPYTPSVTEQLKPEDFTACLEEKEAEVVEEEREEPETEEVKEETKAGKEGE
EEEVREEEEVLTSPEKEEEREDGEEDSGILSDKERQNEEVNEKDNCSASSISSAGSTLER
EERGSNENGPWTQSVKEVDVNEQCSKILNSKRFMLDMLYSQNKEPCEEDEEEERGKEKGV
GGKANQEAVQPSDEGEESTRKTDFPEKKESHSNVRVFAERFGDLVKGLGSPPTPLNSPSH
EAAVVEQEKPPPPPPKKESDTIWDQLLASPRELRIGDIDFTDLKEEDDEDILNAGLGGSD
SLCPPPPPPPNPYLPSCPPPLLGCPPPPPMPGMRSMPPPPPSAPXAPAPPSEPVQKSKKT
IRLFWSEVRPSDYQYISSRSSGDSLWFKLEPVKIDTSKLEHLFQTKSKEIPVTKKTAADG
KRQEVIVLDSKRSNAINIGLTVLPPPRTIKTAILNFDEYALNKEGIEKILTMIPSEEEKQ
KIQEAQLANPDVPLGSAEQFLLTLSSISELSARLQLWAFKMDYEATEKEVAEPLQDVKEG
MEQLEKNKTLRYILSTLLAIGNFLNGTNAKGFELSYLEKVPEVKDTVHKQSLLHHACSIV
VDHYPQSTDLYSEIGAITRSAKVDFDQLQDNLTMMERRCKASWDHLKVMAKHEMKPTLKQ
KMSDFLKDCAERIIILKIVHRRIINRFHVFLLYLGHPAYGVREISVHRFSKILSEFALEY
RTTRDRVLQQKQKRADHRERNKTRGKMIMDVNAPSDEEEEMESAGQNVSAPGGGVESLQP
QGLGHAEDAAEHEFMKAVLKTSLQGGNRETSGVPGLRTRTRSRPGRGGRVQQAPIPPAAM
GVESQRSGDDEADEIMDRIVRSATQGPSQRAVPRERRRSRANRKSLRRTLKSGLTPEEAL
LLGLSDAAEMPV
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggctacgtttgtctgcagggttcagttcttagacgataccgatccattcaacagcacc
aatttcccggagccgacccgaccaccgcactacacgttccgagaagatatccctcttatc
aatcagatagcaggagtccaccggctacttagagccccgcataagcttgatgactgtgcg
ttgcagctgtcccataatggaacctacttggacctggagtcttctctgtctgaacagagg
gacgagctggagggattccaggaggacatagcagggaccagagggaagaagcatagtgtt
gtcttacgtacccagctgactgttcgagtacatgcttgtatcgaaaaactctacaactcc
aatggacgtgacttgaggagggctctcttctctctcaagcagatttttcaggatgataag
gatctggtccatgagtttgtgatggcagagggtctgacctgtctcatcaaggttggagca
gaggccgaccagaactaccagaattacatccttagagctctgggacagatcatgctgtat
gtggatgggatgaatggagtcatctgtcacattgagaccgtccagtggctctacgctctc
attggctcaaagttccgcctggtggtgaagactgctctgaagttgttgctggtgtttgtg
gaatactcagagtccaacgcctctctacttatagaggccgtcactactgtagacaccaag
agaggttgtaagcagtggtctaatgccatggagatcttagatgagaaggatggagtggac
acagagctgctggtctacggtatgaccctcatcaacaagaccctgtcagcattacctgac
caggactccttctatgacatggtggatgggttggaggaccagaggatggaggctgtagct
aagaggttcctggggaggagaggaactgacctggacctgatggagcaactcaatatctac
gaggcgactctacgtcatgaggatggcgatgatgaatctaatccgcccacagggctctct
ggcctcaaggaccgccgccgcgccagcttcggggacaagaggaggggcctggagaggagg
cggagccgcagagcatctctagggcggtctgggaacgcctcgccctgcagcccgtccact
caacactccgggttccaacccttcaagggacaaggaggagaagacatgagcaagagaact
ggagttcaaagtcctgtcacaccagcaaataagtcttctctgggtggtctcctctcctcc
tcctacagacagcatcaggagtccctgtcggccgagagagagagacgtcgtgcagagaga
gaggaaagactgcagaggatagagagagaggagaggaacaaacacagtcgagactatgtg
gacaaaatggaagaggccaggatggcacgggatgagaggtataagcacgtggaacgcttg
gcggcagaggagtttgagagggaccgcgtgcccaggtcacgccccgacctgagtttgacc
tttaacccagtggaagcctgggcccccacctcgtcccgcagcaccaccccctcctccctg
gcgtctcaggatgaggaacagaaccaggaaccagaggaaccagacacagaaactgatcta
gaaccagaggagactgagacccctgttacaccatacacaccctcggtgactgaacaactg
aagccagaggacttcactgcctgtctagaagagaaggaggcagaagtggtagaagaggaa
agagaagagccggaaacagaggaagtaaaggaagaaacaaaagcagggaaagagggagaa
gaagaagaggtgcgagaggaagaagaggttttaacatcgccggagaaggaagaggagagg
gaggacggcgaggaggacagtgggattctgagcgacaaggaacgacagaatgaagaagtg
aacgagaaagacaactgctcggcctccagtatctcctctgccggcagtaccctggaaaga
gaggagagggggagcaatgagaatggtccgtggacccagagtgttaaggaggtggatgtg
aatgaacagtgcagcaaaatcctcaacagcaaacgcttcatgctagacatgctctactcc
cagaacaaggagccctgcgaggaggatgaggaggaggagagggggaaggaaaaaggagta
ggtggaaaggccaaccaggaagccgtccaaccgtctgacgagggagaggagagcacccgg
aaaaccgacttcccggaaaaaaaggaatctcactcgaacgtcagagtgttcgctgaacgt
ttcggggatctagtaaaaggactgggctcgcctcccacccccctcaatagcccctctcat
gaggccgccgttgtagaacaagagaagccccctccacctccccctaagaaggagtcagat
accatctgggaccaactcctggccagtcctagggagctgcgcatcggagacatcgacttc
acagacctgaaagaggaagacgatgaagacattctgaatgccggtctggggggttcagac
tccctgtgtccccctcctcccccaccccctaacccttacctcccatcctgccccccaccc
ctgttgggttgtccaccaccacccccaatgccagggatgagaagcatgcctcctccgccc
ccttctgctccgncggcccccgcccctccttcagaaccagtccagaagagtaagaagacg
atccggttgttctggagtgaggtgcgtccgtcagactaccagtacattagcagcaggagc
agtggagactctctgtggttcaaactagagccggtcaagatagacacgtccaaactagaa
cacctcttccagaccaagtccaaggagatacctgtcaccaagaaaacggcagcggacggt
aaacgccaggaggtcatcgttctggactccaagaggagtaacgccatcaacatcggactg
accgtcctgcctcctcctcgcaccatcaagaccgccattctcaactttgatgagtacgca
ctcaacaaggagggcatcgagaaaatcttgacgatgatcccttcggaggaggagaagcag
aagatacaggaagctcagctggccaacccggacgtccccctgggctcagcagaacagttc
ctcctcaccctgtcctccatcagtgaactgtcagccagactacagctctgggccttcaag
atggactacgaggctacagagaaggaagtggcagagccactgcaggatgtgaaggaaggg
atggagcagctggagaagaacaagactctgcgctacatcctgtctacgctgctggctata
ggaaacttcctcaacggcaccaatgccaaaggctttgagttgagttacctggagaaggtt
cctgaggtgaaggacacggttcataaacagtctctgctgcaccatgcctgttccatcgtg
gtagaccactaccctcagagtactgacctttactctgagataggagctatcacacgctct
gccaaggtggactttgaccagctgcaggacaacctgaccatgatggagcgccgttgcaaa
gcatcctgggaccatctgaaggtgatggccaagcatgagatgaagcccacgctgaaacag
aagatgtctgacttcctgaaggactgtgctgagagaatcattatcctgaagatagtgcac
cgcaggattatcaacaggttccatgtgttcctgctgtacctgggccacccagcctacggt
gtgagggagatcagtgtccaccggttcagtaagatcctcagtgagtttgctctggagtac
cggaccacacgcgaccgcgtcctgcaacagaaacagaaacgagccgaccaccgcgaacgc
aacaagacccgcgggaagatgatcatggacgtcaacgcaccctctgatgaagaagaggaa
atggagtctgcagggcagaatgttagtgcccccggtggcggggtggagagcttgcagcct
caaggtttgggccatgctgaggatgctgcagagcatgaattcatgaaggcagtactgaag
accagccttcagggcggcaacagagagacatcaggggtgccgggtctacgcacacgtacc
aggtcacggccaggccgagggggtcgtgtacaacaggcaccgataccccccgcggcgatg
ggggtggagtctcagaggtcaggtgacgatgaggctgatgagatcatggatcgcatcgtg
aggtcagccactcagggccccagtcagagggcagtgccccgggaaaggaggaggtcaaga
gccaaccgcaaatcactgagacggacactgaagagcggtctgacaccagaagaggcccta
ctcctcggactctccgacgccgccgagatgccggtgtga
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