Oncorhynchus tshawytscha (Chinook salmon): 112241784
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Entry
112241784 CDS
T05605
Name
(RefSeq) amyloid-beta A4 protein-like isoform X1
KO
K04520
amyloid beta A4 protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112241784
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112241784
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
otw00535
]
112241784
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112241784
Peptidases and inhibitors [BR:
otw01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
112241784
Proteoglycans [BR:
otw00535
]
Cell surface proteoglycans
Others
112241784
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Others
112241784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
VSG_B
Motif
Other DBs
NCBI-GeneID:
112241784
NCBI-ProteinID:
XP_042175766
UniProt:
A0A8C8BTD3
LinkDB
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Position
LG03:65254521..65306190
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AA seq
754 aa
AA seq
DB search
MGERTAFLLLWVATLTLASEVPSDDSVGLLAEPQVAMFCGKFNMHVNVQSGKWESDPFGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPVSIQSWCKKGRKKGRKECSSHTHIVVPY
RCLVGEFVSDALLVPDKCKFLHQERMDMCESHLHWHTVAKESCGDRSMNLHDYGMLLPCG
IDRFRGVEFVCCPAETQRESDSVELTESDVWWGGDETEYTDNNMPRQADQGAVTTEEDDE
EDAFDRDEDGDGLEDDDDEDDEDDVTDERDSGEGTSNIAMTTTTTTTTESVEEVVREVCW
ARAESGPCHAILERWYFVPEKGTCAPFLFGGCGGNRNNFDSEEYCLSVCSTSVLPTTAPS
PPGAVDRYLESPGDDSEHANFQQAKESLEAKHRERMSQVMREWEEAERQAKSLPRADKKA
VIQHFQEKVEALEQEAAGERQQLVETHMARVEALLNSRRHMALENYLGSLQANPPRPRQV
LGLLKKYVRAEQKDRQHTLKHYEHVRMVDPKKAAQIRPQVMTHLRVIDERMNQSLGLLYK
VPSVTNEIQDQVSVLMQRVQSELSQQVSSLQSDGRSDGRVSYGNDALMPDQAYSSAPLDP
GMGLDRLGFIHPESFNQPNTDNHVDPVDARPVPDRGLPTRPVSALKPEEVPEVRVEKEER
QSASYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIIISLIMLRKKQYTSIHHGII
EVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagcgaacggcatttctgctgttatgggttgcgaccttgacgctggcatctgag
gtgccttctgatgactcagtgggtctgctggcagagccccaggtagccatgttctgtggg
aaattcaacatgcatgtcaacgttcagagtggcaagtgggagtcggatccctttggcacc
aagagctgcatcggaaccaaggagggcatcctgcagtactgtcaggaggtgtaccctgag
ctccagatcactaacgtggtggaggccaaccagccagtcagcattcagagctggtgcaag
aagggacgcaagaagggacgcaaggagtgtagcagtcacacacacatcgtggtgccctac
cgctgcctggttggagagtttgtgagtgatgccctgctggttcctgataagtgcaagttc
ctgcatcaggagagaatggacatgtgtgagagccacctgcactggcacaccgtggctaaa
gagtcctgcggcgaccgctccatgaatctccatgactacgggatgctgttgccatgcggc
atcgaccgtttccggggggtggagtttgtgtgttgcccagcggagacacagcgcgagtca
gacagtgtggagctgactgagtctgatgtgtggtggggtggagacgagactgaatatacc
gataacaacatgcctcgccaggcggatcagggggctgtcaccactgaggaggatgacgaa
gaggatgcctttgacagagacgaggacggagatggtcttgaggatgatgatgatgaagac
gatgaggatgacgtgaccgatgaacgggacagtggtgaaggcacctccaacattgccatg
acaaccaccaccacgaccaccactgagtcggttgaggaagtcgttagagaggtgtgttgg
gcgcgtgctgagtcgggcccgtgccatgccattctggagcgttggtacttcgtgccagag
aagggcacctgtgcccccttcctctttggagggtgtgggggcaaccggaataactttgac
tcagaggagtactgcctgtctgtctgcagcaccagtgtgttgcctaccacggccccctcc
ccccctggcgcggtggaccgttacctggagtctcccggagacgacagcgaacacgccaac
ttccagcaggccaaggagagtctggaggccaagcaccgcgagaggatgtctcaggtgatg
agagagtgggaggaagcagagagacaagccaagagtctccctcgcgctgacaagaaggca
gtcatccagcacttccaggagaaggtggaggccctggagcaggaggcagcaggagagagg
cagcagctggtggagacccacatggcccgggtggaggccctgctcaacagccgccgccac
atggccctggagaactacctcggctccctgcaggccaacccacccaggcctcgtcaggtg
cttggcctgttgaagaagtatgtccgtgcagaacagaaggacagacaacacaccctgaaa
cactacgagcacgtccgcatggtggaccccaaaaaggctgctcagatccgaccccaggtg
atgacacacctgcgtgtgattgacgagaggatgaaccaatccctggggctgctctacaag
gtgcccagcgtgaccaatgaaatccaagaccaagtttctgtcctgatgcagagggttcag
tcagagctgtctcagcaagtctcatctctgcagagcgatgggaggagtgatggcagggtg
agctatggaaacgatgccctgatgcccgaccaggcttacagctctgcccctctggaccct
ggcatgggcctggatcgactgggcttcatccacccagagagcttcaatcagcccaacact
gacaaccacgttgatcctgttgatgctcgtccagtcccagatagaggtctgcccactcgg
cctgtgtctgctctgaagcctgaggaggttcctgaggtgcgggtggagaaggaggagcgg
caaagcgccagctatgaagtgcatcatcaaaaactggtgttctttgctgaggatgtaggc
tccaacaagggtgccatcatcggcctgatggtgggcggcgttgtcatagcgacagtcatc
atcatctctctgattatgctgaggaagaagcagtatacctccatccaccacggaatcatc
gaggtggatgctgcagtgaccccagaggagcgtcacctgtccaagatgcagcagaatggc
tatgagaaccccacctacaagttcttcgaacagatgcagaactaa
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