Oncorhynchus tshawytscha (Chinook salmon): 112241794
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Entry
112241794 CDS
T05605
Name
(RefSeq) GA-binding protein alpha chain isoform X1
KO
K09441
GA-binding protein transcription factor, alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112241794
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
112241794
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ets
GABP-alpha
SAM_PNT
ubiquitin
Motif
Other DBs
NCBI-GeneID:
112241794
NCBI-ProteinID:
XP_024265598
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Position
LG03:complement(65310765..65323197)
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AA seq
440 aa
AA seq
DB search
MSKSETEEMIEIEIDGQEKQECLEEGVEEQTITSADLIQQDIDINEPIGNLKKLLEPRIQ
MSLDGYEICLQDIQLHPDHSLFDQGVKTDGTVQLSLQIITKPGEEKLNILEIVKPVETVE
VVIDPDAAGEEGTLMEEGQLIAVEHSSLSDDTSEQVTRWAAALEGYRKEQVRLGIPYDPE
QWTADQVIHWAVWVMKEFSIDEMEVGGIHIPGRDLCSFTQEEFLQRVPSGEILWSHLELL
RKYVLASQDQSGQEATVTIDQQVQIIPAAVQTTPTTIKVLKQNRGPRTPRISGGEERSSP
GNRTGNNGQIQLWQFLLELLTDKDARDCISWVGEEGEFKLNQPELVAQKWGQRKNKPTMN
YEKLSRALRYYYDGDMISKVQGKRFVYKFVCDLRTLIGYSAAELNNLVTECEQKKLARIQ
LHGIGQPITTVTLATSAQDS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagtgagacagaggagatgatagagattgagatcgacggacaggagaaacag
gagtgcctggaggagggggttgaggagcagaccattacatcagccgatctgatccaacag
gacatcgacatcaatgagccaatcggtaacctgaagaagctcctggagccccgtatccag
atgtcattggatggatatgaaatctgtctacaggacatccagctgcatccagaccacagc
ctctttgatcaaggagtgaagacagacggcacagtgcaactcagtctacagatcatcaca
aagccaggcgaggagaagctgaacatcctagagatcgtgaaaccggtggagacggtggag
gtggtgatcgacccggatgcggcaggggaggagggcaccctgatggaggagggccagctg
attgctgtggagcactcctccctgtcagatgacacctcggagcaggtgacacgctgggcc
gccgccctggagggctaccgcaaggaacaggtccgtctggggataccctacgacccagaa
cagtggacagcggaccaggtgatccactgggccgtgtgggtgatgaaggagttcagcatt
gacgagatggaggtgggagggattcacatcccgggtcgcgacctctgctccttcacccag
gaagagttcctgcagagggtccccagtggagagatcctttggagccacttagagctgctc
cgcaagtatgtgttggccagtcaggaccagtctggccaggaggccacagtcaccattgac
caacaagtccagatcatcccagctgccgtgcagaccacacccaccactatcaaggtactg
aagcagaaccgcggccccagaacaccccgcatctcaggaggagaggagcgcagctcacct
ggcaaccgcacaggtaacaacggtcagatccagctgtggcagttcctgttggagctgttg
acggataaggatgctagagactgtatctcctgggtgggagaggagggagagttcaaactc
aaccagcctgaactggtggcccagaaatggggccaacgcaagaacaagcccaccatgaac
tatgagaaactcagccgagcgctcaggtattactacgacggggacatgatcagcaaggtg
cagggcaagcgcttcgtctacaagtttgtgtgtgacctgaggacgttgattggctacagc
gctgctgagctcaacaacctggtgacggagtgtgagcagaagaagctggcacgcattcag
ctgcacgggattggccagcccatcaccacggtgacactggccacctcagcacaggacagc
tga
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