KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112241819
Entry
112241819         CDS       T05605                                 
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112241819
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:otw03041]
    112241819
Spliceosome [BR:otw03041]
 Complex A
  U2 snRNP components
   U2 related factors
    112241819
 Complex B
    112241819
SSDB
Motif
Pfam: zf-CCCH Torus RRM_1 zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 112241819
NCBI-ProteinID: XP_024265621
UniProt: A0AAZ3Q0B2
LinkDB
Position
LG03:65328392..65342517
AA seq 232 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYLKFRRE
EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKGGGHRSRSSSRERRSRSRDRGRGGRRDRKRRRSRERSGRF
NT seq 699 nt   +upstreamnt  +downstreamnt
atggcggagtacctggcgtccattttcggtacagagaaagataaggtgaactgttctttc
tactttaaaattggtgcctgccgacatggtgaccggtgctccagattacataataagcca
actttcagccagaccattgccctgttgaacatttaccgtaaccctcaaaacactgcccag
tctgccgatggtttgcgctgtgccgtcagtgatgtggagatgcaggagcactatgatgag
ttctttgaggaggtcttcacagagatggaggagaagtacggagaggtggaggagatgaat
gtgtgcgacaacctgggagaccatctggttggaaacgtatacctgaagttccgtcgtgag
gaagacgcggagaaggccgtgatggatctgaataaccgttggttcaacggtcaaccaatc
cacgccgagctctctcccgttacagacttcagagaagcctgctgccgccagtacgagatg
ggggagtgcactcgaggaggcttctgtaacttcatgcatctgaaacccatctccagggag
ctgaggagggagctgtacggtcgccgcaggaagaagggagggggccatcgttctcgctcc
agttccagggaacgccgttctcgctcgagggatagaggcaggggaggcagacgtgaccgc
aagagaaggcgttccagagaacgctctggcaggttctaa

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