Oncorhynchus tshawytscha (Chinook salmon): 112241913
Help
Entry
112241913 CDS
T05605
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112241913
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112241913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CRAL_TRIO_2
PH
SH3_1
SH3_2
Spectrin
CRAL_TRIO
hSH3
PH_10
SH3_3
Motif
Other DBs
NCBI-GeneID:
112241913
NCBI-ProteinID:
XP_042175789
LinkDB
All DBs
Position
LG03:complement(67313864..67417350)
Genome browser
AA seq
1169 aa
AA seq
DB search
MLRKPRKSPLSRRSCSGEKIPLVPLRSNEIMQQENSPLCAIDITPDLRKKFAFLLGGRGQ
NGSPIIVFPEFSAFGEIQEREFHNVLTYLTNVPSLSAAGVGFILVIDRRQDRWAAVKGTL
LRIAGSFPGNLQLVLVLRPTTLFQRTLSDILFKFNKDEFKMKVPVIMLSSVTELHSYIDQ
TQLTTELGGTQEYCHEQWISHRTDMEGFALMVKRTAQILQSFGTELAETELPNDIQATAN
LLRSHTDKKDKMKEDLHVALGQGSRLLESINEPVVIDPDHNRNQGELENLSTVQRLLSQL
DETERACDEFWGTHQAKLEQCLQLRHFEHNFREMRCLLDQVAERLTAFSEVGINPAHADH
IFCDLNSHEARVLEVLDEAQALAREGDELIQSSHYAEDSIQPKCSELRAVSKELSSTLRA
RKDHLLRAMELHHNLERAAKWCGDGLYLLASQPVDKCQSHEGAESALQEMEHYLDTAGHN
KLTDPSSIYSDYKTVLNQDFRDQIDKVFQKQVSVQEMFEKRMVSLKKLAAKQTRPVQPVA
PRPEAFIKSPLSSPAKRVLEKSCSEGDSVNGVSSRTVEGQLQSSRSTSLSEEDENLAILR
KHVMNELLETERGYVEELHCVLQGYASEMDNPAMASLMPAPLQNKKDVLFGNMPEIYTFH
KRTFLRELEEYQGCPELVGRCFLQRMTDLQIYEKYCQNKPRSESLWRQCSDCTFFQECQK
KLEHKLGLDSYLLKPVQRITKYQLLLKELLKYSKGCEGSEALQEALTSILGILKAVNDSM
HLIAITGYDGHLGDLGRLLMQGSFSVWTEHKKGHAKVKDMARFKPMQRHLFLHEKALLFC
KRREENGEGYEKAPSYSFKQSLSMSAVGITENAKGDNKKFEVWCNSRDEVYIVQAPTTEV
KTTWVNEIRKVLTTQLEAYRDLPACLPEASQQRSSDGLFQFPPTAGEPVSLGSFRRGERS
MKVKKGEPSSPDANSSPITKDGAVTSPTFNRAAVAKKRFTLQGFSNFSKGSPTSPDHKTK
RHEIKSDPTPFGFKGWTKGSLSLDANEENDGYSSTEEPLTSDPEDEGGKKLCAGKYTVVS
DYEKCSTQDLSVKSGETVQLIKEGEDGQWFVKNLKTKQEGWVAAANLYTLIGESTSCQSL
TSSEGSGSGNLSTSSSCCETNTSSSDIKP
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggaagcccaggaagagccctctgagtcggagaagctgcagtggggaaaagata
cccctggtgccactgagatcgaatgagatcatgcagcaggagaacagccccctctgtgcc
atcgacatcacccctgaccttaggaagaagtttgccttcctgttagggggccgagggcag
aacggcagccccatcatcgtgttcccagagttctctgctttcggagagattcaggagagg
gagttccacaacgtgctcacttacttgaccaacgtccccagtctgtctgcagcaggagtg
ggtttcattctggtcattgaccgaaggcaggaccgatgggctgccgtcaaggggaccctg
ctccgcatcgcaggttcattcccagggaacctgcagttggttctggtattgaggcccacc
acattattccagaggactctatcagacatcctgttcaagttcaacaaggatgagttcaag
atgaaggtgccggtgattatgttgagttctgtgactgagcttcactcctacatagaccag
acacaattgactactgagctgggaggaacgcaggagtactgccacgagcagtggatctca
caccgtaccgacatggagggctttgctttgatggtgaagagaacagctcagatcctgcag
tcgtttgggacagagctagcagagactgaactacccaatgacatccaggctactgcaaac
ttactgagatcacacactgacaagaaagacaagatgaaggaggatctacatgtggctcta
ggacagggcagcagactgttggagagtattaatgagccagtggtcatagatcccgatcac
aacaggaaccagggcgaactggagaacctgtccaccgtacagagactgttgtcccagttg
gatgagacagagcgggcatgtgatgagttctgggggacacaccaggccaagctggagcaa
tgtctgcagctccgccactttgaacacaacttcagagagatgagatgtctgctggaccag
gtggcagagagattgacagctttctcagaggtgggaataaaccctgcccatgctgatcac
atcttctgcgacctgaacagccacgaggcgagagtcttagaggtattggacgaagcccag
gctttggcccgagagggtgacgagttgatccagagctctcactacgctgaggactccatc
cagcccaaatgcagcgagctccgagccgtgagcaaggaacttagttccaccctgagagca
aggaaagatcacctactcagagctatggaactacaccacaatctggagagggctgctaaa
tggtgtggtgatggcctctacctgctggcctcccagcccgtggacaagtgtcagtcacat
gaaggggcggagtcagcgctgcaggaaatggagcattacctagatacggcgggacacaac
aaactaactgatcctagctccatctacagtgattacaagacagtgctcaaccaggacttc
agggaccaaatagataaagtctttcagaagcaggtatccgtgcaggagatgtttgagaag
aggatggtcagtctgaagaagctggcagccaaacaaaccaggccagtccagcctgtggcc
ccaaggcctgaagccttcatcaagtccccactctcctcgccagcaaagagagtgctggag
aagagttgctcagagggagactctgtgaatggggtcagcagtagaacagtggagggccag
ctacagagcagcagaagtacctcactgtcagaggaggacgagaacctggccatcctcaga
aaacatgtaatgaatgagctactggagacagaaagggggtacgtggaggaactgcactgt
gtcctacagggctatgcctcagagatggacaatccagccatggccagcctcatgcccgct
cctctgcagaacaagaaagatgtgctgtttggcaacatgccagagatctacaccttccac
aagaggacctttctgagggagttagaagagtaccaaggctgcccggaacttgtgggtcgt
tgttttttgcagaggatgacagacctgcagatctatgagaagtattgtcagaataaacct
cgctctgagagcttgtggagacagtgctccgactgcaccttcttccaggaatgtcagaag
aagctggaacataaactgggcttggattcctatctcctgaaaccggttcagaggatcacc
aaataccagctcctgttgaaggagctgctaaagtacagtaagggctgtgaggggtcagag
gccctgcaggaggcgctcacctctatcctgggaatcttgaaggctgtcaatgactccatg
catctcattgctatcactggatacgatggtcacctgggtgacctgggccggctgctgatg
caggggtcattcagcgtgtggacggaacacaagaaaggtcacgccaaggtcaaggacatg
gcccgcttcaagcctatgcagagacacctgttcctgcacgagaaagccctgctcttctgt
aagagacgcgaagagaatggggagggctacgagaaagccccgtcctacagcttcaaacag
tcccttagtatgagtgctgtgggcatcactgagaatgccaaaggtgacaacaagaagttt
gaggtctggtgcaactcacgggacgaggtgtacattgtgcaggccccgacgactgaggtg
aaaacgacgtgggtgaacgagatccggaaggttctgacaacacagctggaggcctacaga
gatctccctgcatgtcttccagaagccagccaacagaggtcgtcagacggactgttccag
ttccctcctaccgctggagaacctgtcagccttggttcatttagaagaggggagaggagc
atgaaggtgaagaagggagaacccagcagccccgacgctaactcctccccaataaccaaa
gacggggcagtgaccagtcctacctttaacagagcagcagtggctaaaaagcgttttacc
ttgcagggcttcagcaacttcagcaaaggttctcccacaagccctgaccataaaaccaaa
cgtcatgagataaagagtgatcccactccgttcggcttcaaaggatggactaagggctct
ctctcattggacgccaacgaggagaatgatgggtactctagcactgaagagcccctaacc
tccgaccctgaggacgaggggggaaagaaactgtgtgcagggaagtacacagtggtgtct
gactatgagaagtgcagcacccaggatctgtcagtcaagagtggtgaaacagttcagctg
atcaaggagggagaagatggccagtggtttgtgaagaatctgaagactaagcaggagggc
tgggtggctgctgccaacctttacaccctgattggagagtccacgtcctgccagtctctc
accagctcagagggcagtggctcagggaacctcagcacttcatccagctgctgtgagacc
aacaccagctcctctgacatcaagccctga
DBGET
integrated database retrieval system
